G1494066


Basic Information

Item Value
gene id G1494066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80097229 ~ 80097768 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708048
TaaataaccaacccataaagtaaaatttaaAAATCCATATacggccagctatgtaaacttgaacattgatttatcctgcaatagatgtttgTCTTCTTCCAAATCCTCTTAAAAGGAAAGTGATATAAAAatgactgaatgtaatcagattacttaactgagtttgggtaatccaaaagttacatgaCTGATTACAAtttgacaggtaactagtaactgtaatggattacatttagaaagtaacctacccaactctAGACTGAGGGGTGTGATCTCAAAGGTACTTACAGGGCTTTAGTTTCACCTGACAGATCTCATTGACCTCAATCTGAAGATGGTAACAAAACCTAATCCACAGTGTGTCCTCTGAGAGATGGAAGAAGGACAACTCCAGCACTCAGCTTTCGTAAATTGTAAGAACCACTAAACAAATTAGGATCAGTTGACGCAAAAAAGGGTTGAGGCCAGTGCATGAGACCCGAAACCTGTCTATGTGaccttactgtactgtatatacactgaataaaaatatgaatgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708048 True 540 lncRNA 0.36 1 80097229 80097768

Neighbor

gene id symbol gene type direction distance location
LOC110494682 edem1 coding upstream 50166 80038726 ~ 80047063 (+)
LOC110494679 LOC106565990 coding upstream 55478 80025090 ~ 80041751 (+)
LOC110495196 LOC106565991 coding upstream 79454 80015109 ~ 80017775 (+)
LOC110493270 LOC106565994 coding upstream 117134 79959861 ~ 79980095 (+)
LOC110494662 LOC106565996 coding upstream 166426 79926360 ~ 79930803 (+)
LOC118940652 NA coding downstream 189177 80286945 ~ 80286998 (+)
trnak-cuu-20 NA coding downstream 326110 80423878 ~ 80423950 (+)
trnak-cuu-21 NA coding downstream 327092 80424860 ~ 80424932 (+)
trnak-cuu-22 NA coding downstream 328073 80425841 ~ 80425913 (+)
trnak-cuu-23 NA coding downstream 329848 80427616 ~ 80427688 (+)
G1494064 NA non-coding upstream 788 80096151 ~ 80096441 (+)
G1494061 NA non-coding upstream 2094 80094889 ~ 80095135 (+)
G1493767 NA non-coding upstream 24016 80065105 ~ 80073213 (+)
G1493756 NA non-coding upstream 78441 80018563 ~ 80018788 (+)
G1493744 NA non-coding upstream 96751 80000262 ~ 80000478 (+)
G1494065 LOC106565988 non-coding downstream 873 80098641 ~ 80101348 (+)
G1494067 LOC106565988 non-coding downstream 4200 80101968 ~ 80102396 (+)
G1494068 LOC106565988 non-coding downstream 5923 80103691 ~ 80103913 (+)
G1494076 NA non-coding downstream 17674 80115442 ~ 80115657 (+)
G1494129 NA non-coding downstream 109057 80206825 ~ 80207098 (+)
tusc2 tusc2 other upstream 711792 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 761157 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1321502 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1843921 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1906939 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1195672 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1239249 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1334443 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 1730964 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2065438 82163138 ~ 82169750 (+)

Expression


Co-expression Network