G1494129


Basic Information

Item Value
gene id G1494129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80206825 ~ 80207098 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708113
AGTCATTGAGAAGGTAGTAAACAAAATCCTATTCAATTATTCTTCTCAGTGTAGCCTACGAATGAAGCAGCGGACATCCTGCACGATTCCCTGGTAACAAATATATAGGTTCCAAATGAACTTGTTAATCACCTCAGCTTGCAATATTTGTGTCCTCTATGCTCTTTTCTCAGTCTATTGTGTACAATCCCACTTTGTTGTTCTCATAATGAGCGTTATTCCTTGAAATGGAGTAGTTGCTAAAGTTGAAACGCGGCGCACGCAACACAGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708113 True 274 lncRNA 0.40 1 80206825 80207098

Neighbor

gene id symbol gene type direction distance location
LOC110494682 edem1 coding upstream 159762 80038726 ~ 80047063 (+)
LOC110494679 LOC106565990 coding upstream 165074 80025090 ~ 80041751 (+)
LOC110495196 LOC106565991 coding upstream 189050 80015109 ~ 80017775 (+)
LOC110493270 LOC106565994 coding upstream 226730 79959861 ~ 79980095 (+)
LOC110494662 LOC106565996 coding upstream 276022 79926360 ~ 79930803 (+)
LOC118940652 NA coding downstream 79847 80286945 ~ 80286998 (+)
trnak-cuu-20 NA coding downstream 216780 80423878 ~ 80423950 (+)
trnak-cuu-21 NA coding downstream 217762 80424860 ~ 80424932 (+)
trnak-cuu-22 NA coding downstream 218743 80425841 ~ 80425913 (+)
trnak-cuu-23 NA coding downstream 220518 80427616 ~ 80427688 (+)
G1494076 NA non-coding upstream 91168 80115442 ~ 80115657 (+)
G1494068 LOC106565988 non-coding upstream 102912 80103691 ~ 80103913 (+)
G1494067 LOC106565988 non-coding upstream 104429 80101968 ~ 80102396 (+)
G1494065 LOC106565988 non-coding upstream 105477 80098641 ~ 80101348 (+)
G1494066 NA non-coding upstream 109057 80097229 ~ 80097768 (+)
G1494216 NA non-coding downstream 7517 80214615 ~ 80214947 (+)
G1494242 NA non-coding downstream 37480 80244578 ~ 80245063 (+)
G1494253 NA non-coding downstream 46646 80253744 ~ 80254178 (+)
G1494313 NA non-coding downstream 96576 80303674 ~ 80303896 (+)
G1494316 NA non-coding downstream 98596 80305694 ~ 80306069 (+)
tusc2 tusc2 other upstream 821388 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 870753 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1431098 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1953517 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2016535 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1086342 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1129919 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1225113 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 1621634 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1956108 82163138 ~ 82169750 (+)

Expression


Co-expression Network