G1494313


Basic Information

Item Value
gene id G1494313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80303674 ~ 80303896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708300
gtctcccagagGTTCTCCAGCTAGTCTCATGGAACATTGATGGATGGTTTCCCAGACTCAGATCAAACCAATCCCTAGACTAAAAGGAACTTTCAATGAAGAATCTCCATTGAGCATACTTTTTTGGTCCAGGAGTATACTGGGTCTGGGAGACTGTTCCCCAGAGAATCCACATACGGTGTACATTCTGGCTACTACTCATGCGAAACAATGACTAGAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708300 True 223 lncRNA 0.45 1 80303674 80303896

Neighbor

gene id symbol gene type direction distance location
LOC118940652 NA coding upstream 16676 80286945 ~ 80286998 (+)
LOC110494682 edem1 coding upstream 256611 80038726 ~ 80047063 (+)
LOC110494679 LOC106565990 coding upstream 261923 80025090 ~ 80041751 (+)
LOC110495196 LOC106565991 coding upstream 285899 80015109 ~ 80017775 (+)
LOC110493270 LOC106565994 coding upstream 323579 79959861 ~ 79980095 (+)
trnak-cuu-20 NA coding downstream 119982 80423878 ~ 80423950 (+)
trnak-cuu-21 NA coding downstream 120964 80424860 ~ 80424932 (+)
trnak-cuu-22 NA coding downstream 121945 80425841 ~ 80425913 (+)
trnak-cuu-23 NA coding downstream 123720 80427616 ~ 80427688 (+)
trnak-cuu-24 NA coding downstream 125208 80429104 ~ 80429176 (+)
G1494253 NA non-coding upstream 49496 80253744 ~ 80254178 (+)
G1494242 NA non-coding upstream 58611 80244578 ~ 80245063 (+)
G1494216 NA non-coding upstream 88727 80214615 ~ 80214947 (+)
G1494129 NA non-coding upstream 96576 80206825 ~ 80207098 (+)
G1494076 NA non-coding upstream 188017 80115442 ~ 80115657 (+)
G1494316 NA non-coding downstream 1798 80305694 ~ 80306069 (+)
G1494322 NA non-coding downstream 8636 80312532 ~ 80313116 (+)
G1494334 NA non-coding downstream 17608 80321504 ~ 80321766 (+)
G1494335 NA non-coding downstream 18572 80322468 ~ 80322876 (+)
G1494347 NA non-coding downstream 58256 80362152 ~ 80364363 (+)
tusc2 tusc2 other upstream 918237 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 967602 79321093 ~ 79336076 (+)
G1492310 NA other upstream 1527947 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2050366 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2113384 78189012 ~ 78190290 (+)
G1495346 NA other downstream 989544 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1033121 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 1128315 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 1524836 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1859310 82163138 ~ 82169750 (+)

Expression


Co-expression Network