Gene
RNA
| Item | Value |
|---|---|
| gene id | G1494870 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 80597994 ~ 80598532 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: THAP domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1708910 | True | 539 | TUCP | 0.44 | 1 | 80597994 | 80598532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494670 | LOC106582756 | coding | downstream | 16157 | 80554017 ~ 80581837 (-) |
| trnai-uau-36 | NA | coding | downstream | 105178 | 80492723 ~ 80492816 (-) |
| trnai-uau-35 | NA | coding | downstream | 107643 | 80490258 ~ 80490351 (-) |
| trnai-uau-34 | NA | coding | downstream | 113514 | 80484387 ~ 80484480 (-) |
| trnai-uau-33 | NA | coding | downstream | 115010 | 80482891 ~ 80482984 (-) |
| LOC110494678 | LOC106566067 | coding | upstream | 77820 | 80676352 ~ 80680210 (-) |
| gnai2b | LOC106566064 | coding | upstream | 84651 | 80683183 ~ 80781256 (-) |
| LOC110494674 | LOC106566062 | coding | upstream | 185203 | 80783735 ~ 80842201 (-) |
| LOC110494672 | LOC100380672 | coding | upstream | 269597 | 80868129 ~ 80882244 (-) |
| LOC110494680 | LOC105023696 | coding | upstream | 283921 | 80882453 ~ 80884866 (-) |
| G1494499 | NA | non-coding | downstream | 95875 | 80501539 ~ 80502119 (-) |
| G1494487 | NA | non-coding | downstream | 108701 | 80484931 ~ 80489293 (-) |
| G1494473 | NA | non-coding | downstream | 117583 | 80423310 ~ 80480411 (-) |
| G1494394 | NA | non-coding | downstream | 244764 | 80352982 ~ 80353230 (-) |
| G1494392 | NA | non-coding | downstream | 249192 | 80348280 ~ 80348802 (-) |
| G1494877 | NA | non-coding | upstream | 17874 | 80616406 ~ 80616897 (-) |
| G1494932 | NA | non-coding | upstream | 109548 | 80708080 ~ 80708400 (-) |
| G1494987 | NA | non-coding | upstream | 255014 | 80853546 ~ 80853878 (-) |
| G1494988 | NA | non-coding | upstream | 255582 | 80854114 ~ 80854334 (-) |
| G1494054 | NA | other | downstream | 510357 | 80071639 ~ 80087637 (-) |
| G1493395 | LOC106582800 | other | downstream | 1248605 | 79348231 ~ 79349389 (-) |
| G1492898 | NA | other | downstream | 1782565 | 78771571 ~ 78815429 (-) |
| G1492901 | NA | other | downstream | 1784039 | 78803860 ~ 78813955 (-) |
| G1492910 | NA | other | downstream | 1816599 | 78778352 ~ 78781395 (-) |
| G1494924 | NA | other | upstream | 93890 | 80692422 ~ 80694102 (-) |
| G1495003 | NA | other | upstream | 296556 | 80895088 ~ 80895437 (-) |
| G1495113 | NA | other | upstream | 467439 | 81065971 ~ 81066682 (-) |
| LOC110494689 | LOC106566051 | other | upstream | 494987 | 81090497 ~ 81103942 (-) |
| G1495222 | NA | other | upstream | 511913 | 81110445 ~ 81115238 (-) |
