G1494707


Basic Information

Item Value
gene id G1494707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80863632 ~ 80863911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708730
acactggggccccacaaaggagcctgctcagccccctcctgtactccctgttcacccacgactgtgtggccatgcacgcctccaactctatcatcaagtttgcagacgacacaacagtagtgggcttgatgcccaacaacaacgagacagcctacagggaggaggtgagggcactcggagtgtgttatcatgaaaacaacctctcactcagcgtcaacaaaacaaaggagatgatcgtggacttcaggaaacagcagagggagcaccccctatccacatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708730 True 280 lncRNA 0.54 1 80863632 80863911

Neighbor

gene id symbol gene type direction distance location
uba7 LOC106566065 coding upstream 188707 80603196 ~ 80674925 (+)
trnan-auu-4 NA coding upstream 365311 80498249 ~ 80498321 (+)
trnak-uuu-123 NA coding upstream 366320 80497240 ~ 80497312 (+)
trnak-uuu-122 NA coding upstream 367901 80495659 ~ 80495731 (+)
trnak-cuu-72 NA coding upstream 369836 80493724 ~ 80493796 (+)
LOC110494684 LOC107554191 coding downstream 28297 80892208 ~ 80937728 (+)
LOC110493271 LOC106566056 coding downstream 83888 80947799 ~ 80978439 (+)
LOC110494685 LOC106566055 coding downstream 119339 80983250 ~ 80993527 (+)
lmod1b LOC106566054 coding downstream 133953 80997864 ~ 81004735 (+)
LOC110494687 LOC106566053 coding downstream 144546 81008457 ~ 81014990 (+)
G1494703 NA non-coding upstream 2982 80860400 ~ 80860650 (+)
G1494638 NA non-coding upstream 60602 80801542 ~ 80803030 (+)
G1494691 NA non-coding upstream 72721 80788337 ~ 80790911 (+)
G1494566 NA non-coding upstream 169587 80692034 ~ 80694045 (+)
G1494575 NA non-coding upstream 268035 80595386 ~ 80595597 (+)
G1494708 NA non-coding downstream 1746 80865657 ~ 80865876 (+)
G1494635 NA non-coding downstream 4287 80868198 ~ 80869265 (+)
G1494634 NA non-coding downstream 18553 80882464 ~ 80883681 (+)
G1494724 NA non-coding downstream 33170 80897081 ~ 80897320 (+)
G1494749 NA non-coding downstream 115699 80979610 ~ 80980512 (+)
tusc2 tusc2 other upstream 1478195 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1527560 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2087905 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2610324 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2673342 78189012 ~ 78190290 (+)
G1495346 NA other downstream 429529 81293440 ~ 81293926 (+)
G1495362 NA other downstream 473106 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 568300 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 964821 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1299295 82163138 ~ 82169750 (+)

Expression


Co-expression Network