G1494635


Basic Information

Item Value
gene id G1494635
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80868198 ~ 80869265 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708653
ATTTAAATACTATTGCCACAACAAAAGGAGAAAAACATGTCTATATCTTCATTCTTACAGAAGGAAATAATGACCTGTGCGTATATATACACAAATTATAAGTTACATAATTCATAGTTTTACACTTTCTCCATTAAAGACCAGTCCTTTCTTTATGCCTCTCTTCCCTGCCAGGCTAATGAGTACAGTAAACATAATTCTCAATCCAATCCCCTTATCGAGCGTGTCATCTTCTCCATGCCGCCATTACAATCCCTTCAGCTCATCTCAAGGTGTCTTTTAATGGATGACTGTAGGGAAGGATGTTAGGATACCCCTGGGTGATGGTCCCACACAGAAAGGAAGGGAACATAGGACCAGAAGGATGTGTCCATTCTTAGGAGGCAGGTGGATTGGGCAAATCACTCCATTTCAGTGAAGCGGGCAAACATGGCTTTGCGGACAGCGTCTTTGTATGTGTCGGAGGCAGACAGGCCGTAGCTGCTGCCTTTGGTTCCAAGACCAGCCCCCTTTGCCCT

Function

NR:

description
RNA-binding protein 5-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708653 True 518 lncRNA 0.44 2 80868198 80869265

Neighbor

gene id symbol gene type direction distance location
uba7 LOC106566065 coding upstream 193273 80603196 ~ 80674925 (+)
trnan-auu-4 NA coding upstream 369877 80498249 ~ 80498321 (+)
trnak-uuu-123 NA coding upstream 370886 80497240 ~ 80497312 (+)
trnak-uuu-122 NA coding upstream 372467 80495659 ~ 80495731 (+)
trnak-cuu-72 NA coding upstream 374402 80493724 ~ 80493796 (+)
LOC110494684 LOC107554191 coding downstream 22943 80892208 ~ 80937728 (+)
LOC110493271 LOC106566056 coding downstream 78534 80947799 ~ 80978439 (+)
LOC110494685 LOC106566055 coding downstream 113985 80983250 ~ 80993527 (+)
lmod1b LOC106566054 coding downstream 128599 80997864 ~ 81004735 (+)
LOC110494687 LOC106566053 coding downstream 139192 81008457 ~ 81014990 (+)
G1494708 NA non-coding upstream 2322 80865657 ~ 80865876 (+)
G1494707 NA non-coding upstream 4287 80863632 ~ 80863911 (+)
G1494703 NA non-coding upstream 7548 80860400 ~ 80860650 (+)
G1494638 NA non-coding upstream 65168 80801542 ~ 80803030 (+)
G1494691 NA non-coding upstream 77287 80788337 ~ 80790911 (+)
G1494634 NA non-coding downstream 13199 80882464 ~ 80883681 (+)
G1494724 NA non-coding downstream 27816 80897081 ~ 80897320 (+)
G1494749 NA non-coding downstream 110345 80979610 ~ 80980512 (+)
G1494745 NA non-coding downstream 125176 80994441 ~ 80994876 (+)
G1494744 NA non-coding downstream 125791 80995056 ~ 80996466 (+)
tusc2 tusc2 other upstream 1482761 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1532126 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2092471 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2614890 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2677908 78189012 ~ 78190290 (+)
G1495346 NA other downstream 424175 81293440 ~ 81293926 (+)
G1495362 NA other downstream 467752 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 562946 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 959467 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1293941 82163138 ~ 82169750 (+)

Expression


Co-expression Network