G1494724


Basic Information

Item Value
gene id G1494724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80897081 ~ 80897320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708748
ATATCAATTTAGATCATACAAGGGACAAACCTTACCTTAAATTGAGATCTTTACATTTTCAGTTAAGTGCTATCCTTTCAAAttcaaatgtttcagttgggcagttaggtttcTGCAAGAACCCCCACTaactaaggaggttcctcgatgaaccccacctcctatggggttcttggaagaaccttttgggggccattttcagtgccaagaaccctaaggttgtcacgccctgaccttaga

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708748 True 240 lncRNA 0.43 1 80897081 80897320

Neighbor

gene id symbol gene type direction distance location
uba7 LOC106566065 coding upstream 222156 80603196 ~ 80674925 (+)
trnan-auu-4 NA coding upstream 398760 80498249 ~ 80498321 (+)
trnak-uuu-123 NA coding upstream 399769 80497240 ~ 80497312 (+)
trnak-uuu-122 NA coding upstream 401350 80495659 ~ 80495731 (+)
trnak-cuu-72 NA coding upstream 403285 80493724 ~ 80493796 (+)
LOC110493271 LOC106566056 coding downstream 50479 80947799 ~ 80978439 (+)
LOC110494685 LOC106566055 coding downstream 85930 80983250 ~ 80993527 (+)
lmod1b LOC106566054 coding downstream 100544 80997864 ~ 81004735 (+)
LOC110494687 LOC106566053 coding downstream 111137 81008457 ~ 81014990 (+)
LOC110494688 LOC106566052 coding downstream 120710 81018030 ~ 81042619 (+)
G1494634 NA non-coding upstream 13400 80882464 ~ 80883681 (+)
G1494635 NA non-coding upstream 27816 80868198 ~ 80869265 (+)
G1494708 NA non-coding upstream 31205 80865657 ~ 80865876 (+)
G1494707 NA non-coding upstream 33170 80863632 ~ 80863911 (+)
G1494703 NA non-coding upstream 36431 80860400 ~ 80860650 (+)
G1494749 NA non-coding downstream 82290 80979610 ~ 80980512 (+)
G1494745 NA non-coding downstream 97121 80994441 ~ 80994876 (+)
G1494744 NA non-coding downstream 97736 80995056 ~ 80996466 (+)
G1494778 NA non-coding downstream 129268 81026588 ~ 81026979 (+)
G1494784 NA non-coding downstream 141495 81038815 ~ 81039760 (+)
tusc2 tusc2 other upstream 1511644 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1561009 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2121354 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2643773 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2706791 78189012 ~ 78190290 (+)
G1495346 NA other downstream 396120 81293440 ~ 81293926 (+)
G1495362 NA other downstream 439697 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 534891 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 931412 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1265886 82163138 ~ 82169750 (+)

Expression


Co-expression Network