G1495034 (LOC106566056)


Basic Information

Item Value
gene id G1495034
gene name LOC106566056
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80947772 ~ 80951061 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1709108
TGCGTGTACCTGTGAGGACCCTCATTGCCCCATGCACTGCGTTGACGTCGCCACTGACCAGCATGTCCATGAGGATGGTGAAGAGCTGAGGCCAGGCCTCGGGCCAGTCCCAGTGGGCAATGGCCGACACAGCATATGCCACACTGGACCGCACCTTACTGATGGACTCCCTCAGGCCTCCTGGCAACAGCTCCCTGATGGCTGCCTTggcCCGGTCTGTGGTCTCTGGGGGTCTGAACTTCTCAGATAGGGAACACCAGTGGGTCTCCACATACTGCTTAAGGATGACTGAGGCCAACTGACGAATGGCCAGAGCTCCCCGAGGGTCCACAGTTAGCTCcgccaggtggactccaaactCCTCTGTCACTTCCAACACTTTTATTTGCTCCTCCGCGGCTGCTCGCACTTCTTGAACCGGGGACAGGATAGCCGTCAACGTCTCAATCAGGGCTTCTTTAAGTCCTTGTTGAACCGGTCCAGCAGCCGAAGCCGACCCAGGACCTGCTGCACTCATGCCTGCCATGTtttcacacacacagcctgagcAAATCAGGATCTCGTCAGCAACATTGGAAAAAGTACTTCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1709108 True 590 lncRNA 0.57 4 80947772 80951061

Neighbor

gene id symbol gene type direction distance location
LOC100135925 LOC106566059 coding downstream 58941 80887457 ~ 80888831 (-)
LOC110494680 LOC105023696 coding downstream 62906 80882453 ~ 80884866 (-)
LOC110494672 LOC100380672 coding downstream 65528 80868129 ~ 80882244 (-)
LOC110494674 LOC106566062 coding downstream 105571 80783735 ~ 80842201 (-)
gnai2b LOC106566064 coding downstream 166516 80683183 ~ 80781256 (-)
LOC110494689 LOC106566051 coding upstream 139436 81090497 ~ 81103942 (-)
LOC110494690 LOC106566049 coding upstream 165398 81115867 ~ 81238629 (-)
LOC110494693 LOC106566045 coding upstream 391136 81342197 ~ 81374548 (-)
LOC110494695 ppm1h coding upstream 445009 81396070 ~ 81420330 (-)
LOC118940159 LOC106565892 coding upstream 530221 81481282 ~ 81488954 (-)
G1495009 NA non-coding downstream 46529 80901011 ~ 80901243 (-)
G1495008 NA non-coding downstream 47608 80899917 ~ 80900164 (-)
G1495006 NA non-coding downstream 50431 80897114 ~ 80897341 (-)
G1495001 NA non-coding downstream 54749 80892215 ~ 80893023 (-)
G1495055 NA non-coding upstream 31491 80982552 ~ 80982830 (-)
G1495057 NA non-coding upstream 33573 80984634 ~ 80984987 (-)
G1495071 NA non-coding upstream 42846 80993907 ~ 80996515 (-)
G1495072 NA non-coding upstream 43372 80994433 ~ 80994887 (-)
G1495059 NA non-coding upstream 58966 81010027 ~ 81011204 (-)
G1495003 NA other downstream 52335 80895088 ~ 80895437 (-)
G1494924 NA other downstream 253670 80692422 ~ 80694102 (-)
G1494870 NA other downstream 349240 80597994 ~ 80598532 (-)
G1494054 NA other downstream 860135 80071639 ~ 80087637 (-)
G1493395 LOC106582800 other downstream 1598383 79348231 ~ 79349389 (-)
G1495113 NA other upstream 114910 81065971 ~ 81066682 (-)
G1495222 NA other upstream 159384 81110445 ~ 81115238 (-)
G1495538 LOC106566048 other upstream 360686 81311747 ~ 81314315 (-)
G1495552 NA other upstream 375624 81326685 ~ 81327113 (-)

Expression


Co-expression Network