G1494749


Basic Information

Item Value
gene id G1494749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80979610 ~ 80980512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708778
aggagacgcgttctgtctcctagagatgaacatactgtggagcgaaaagtgcaaatcaatcccacaacaacagcaaaggaccttgtgaagatgctggaggaaacaggtacaaaagtatctatgtccacagtaaaacgagtcctatatcgacataacctgaaaggccgctcagcaaggaagaagccactgcttcaaaaccgccattaaaaagctagactacggtttgtcACTGTACATGGGGTCAAAGgtcgcactttttggagaaatgtcctctagtctgatgaaacaaaaacagaactgtttggccataatgaccattgttatgtttggaggaaaaagggggagacttgcaagccgaagaacaccatcccaaacttgaagcactggggtggcagcatcatgttgtggggatgctttgctgcaggagggactggtgcatctaatgaaatagatggcatcatggggtaggaaaattatgtggatatattgaagcaacatctcaagacatcaggaagttaaagcttggtcgcaaatgggtcttccaagtggacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagaaaatttgtgagcagaactgaaaaagcgtgtgcgagcaaggaggcctacaaacctaactcagttacaccagctctgtcaggaggaatgggccaaaattcacccagcttattgtgggaagcttgtggaaggctacccgaaacatttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacccactgggaatgtgacgaaagaagtaaaagctgaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708778 True 903 lncRNA 0.44 1 80979610 80980512

Neighbor

gene id symbol gene type direction distance location
LOC110493271 LOC106566056 coding upstream 1171 80947799 ~ 80978439 (+)
LOC110494684 LOC107554191 coding upstream 41882 80892208 ~ 80937728 (+)
uba7 LOC106566065 coding upstream 304685 80603196 ~ 80674925 (+)
trnan-auu-4 NA coding upstream 481289 80498249 ~ 80498321 (+)
trnak-uuu-123 NA coding upstream 482298 80497240 ~ 80497312 (+)
LOC110494685 LOC106566055 coding downstream 2738 80983250 ~ 80993527 (+)
lmod1b LOC106566054 coding downstream 17352 80997864 ~ 81004735 (+)
LOC110494687 LOC106566053 coding downstream 27945 81008457 ~ 81014990 (+)
LOC110494688 LOC106566052 coding downstream 37518 81018030 ~ 81042619 (+)
LOC110494691 LOC106566048 coding downstream 303574 81284086 ~ 81313260 (+)
G1494724 NA non-coding upstream 82290 80897081 ~ 80897320 (+)
G1494634 NA non-coding upstream 95929 80882464 ~ 80883681 (+)
G1494635 NA non-coding upstream 110345 80868198 ~ 80869265 (+)
G1494708 NA non-coding upstream 113734 80865657 ~ 80865876 (+)
G1494707 NA non-coding upstream 115699 80863632 ~ 80863911 (+)
G1494745 NA non-coding downstream 13929 80994441 ~ 80994876 (+)
G1494744 NA non-coding downstream 14544 80995056 ~ 80996466 (+)
G1494778 NA non-coding downstream 46076 81026588 ~ 81026979 (+)
G1494784 NA non-coding downstream 58303 81038815 ~ 81039760 (+)
G1494769 NA non-coding downstream 65047 81045559 ~ 81045798 (+)
tusc2 tusc2 other upstream 1594173 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1643538 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2203883 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2726302 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2789320 78189012 ~ 78190290 (+)
G1495346 NA other downstream 312928 81293440 ~ 81293926 (+)
G1495362 NA other downstream 356505 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 451699 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 848220 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1182694 82163138 ~ 82169750 (+)

Expression


Co-expression Network