G1494744


Basic Information

Item Value
gene id G1494744
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80995056 ~ 80996466 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708773
agttcaagggggccgaatacttacgcaaggcactgtatatcatgccagcaaagccacaatgctcaacaatacattaattgcactataacagtgatcccaatcacggatgTGATTCctcctggattcgaaccagtgactgtagggtcacctcttgcactgagatgcagtgccttagattgctgtgccactcaggagcccataaAGGTGTCCCAACAACAATCCGAATACCTTACCGATGCtatacctggctatcagcggagtctTTTCTGGCAGTGAAACgtttcattcagcctcatttactgcgtttaaaaaataaaacatggctGACTTGCTGAAACAAATGTGgcctgacaattgagatgtacaaactatgacaTAAGGAGATGACGAAGGATAAGAGGCAATGTGTAATTTTGatgaagacattaatgagcgagctaggacgaaCGTAGTCAatttaactatttgttcagcagttttgaaatgtacagcgacagaattcagaacatgggccgttcttacagtattctccctgtacaccaagtcagaaccgcaGGATacataaagggggcatataagcaggcAATGAAAGCTCTTAAAATATATGagtacatttctctaaaacagactataggctacatgtgcaccaccaagtcagaacagtaggcaaaaatTAAGagggggggaaagggaccaaattattagggtgaggcacatgggctactaacatcttactacacaacataaacttaagtatactgtagctaagaaagtaatactatctccttggcatattacataatttggCATATTATGTCATCAGcagcataaaatacatttttggactcaccttgtgctgtgctcacttgaacaggaaagtAGCGCGGCGGGCCTTCGTGggaaaattttgtcatcaaagtctggcattctctggatttatggtgctttcaagacaactggtaaCTTGGGGGAAAAAAATTGGTCGAATCATGATGAattcagtgatcttcaggtcagagctctagaaagtgATCTCAATTCCTAGTTGGATGACtgctcaaaacatattttcccagtcggatctCGTTTTTTCCctagagttcccagttgtctggaACTCAGaattccgagtttccagttgtttagaacgcggcagaagtcatgttggattgacagcatggccaagattgaatgtttatccttttaagcttggaaaagagacccttagaCCACatacccactccactgaatagcaggttagtgattgctttgcaatgcttgcagttagccacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708773 True 1293 lncRNA 0.42 2 80995056 80996466

Neighbor

gene id symbol gene type direction distance location
LOC110494685 LOC106566055 coding upstream 1529 80983250 ~ 80993527 (+)
LOC110493271 LOC106566056 coding upstream 16617 80947799 ~ 80978439 (+)
LOC110494684 LOC107554191 coding upstream 57328 80892208 ~ 80937728 (+)
uba7 LOC106566065 coding upstream 320131 80603196 ~ 80674925 (+)
trnan-auu-4 NA coding upstream 496735 80498249 ~ 80498321 (+)
lmod1b LOC106566054 coding downstream 1398 80997864 ~ 81004735 (+)
LOC110494687 LOC106566053 coding downstream 11991 81008457 ~ 81014990 (+)
LOC110494688 LOC106566052 coding downstream 21564 81018030 ~ 81042619 (+)
LOC110494691 LOC106566048 coding downstream 287620 81284086 ~ 81313260 (+)
LOC110494692 LOC106566047 coding downstream 327101 81323567 ~ 81335099 (+)
G1494745 NA non-coding upstream 180 80994441 ~ 80994876 (+)
G1494749 NA non-coding upstream 14544 80979610 ~ 80980512 (+)
G1494724 NA non-coding upstream 97736 80897081 ~ 80897320 (+)
G1494634 NA non-coding upstream 111375 80882464 ~ 80883681 (+)
G1494635 NA non-coding upstream 125791 80868198 ~ 80869265 (+)
G1494778 NA non-coding downstream 30122 81026588 ~ 81026979 (+)
G1494784 NA non-coding downstream 42349 81038815 ~ 81039760 (+)
G1494769 NA non-coding downstream 49093 81045559 ~ 81045798 (+)
G1494792 NA non-coding downstream 58740 81055206 ~ 81055428 (+)
G1494793 NA non-coding downstream 59514 81055980 ~ 81056188 (+)
tusc2 tusc2 other upstream 1609619 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1658984 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2219329 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2741748 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2804766 78189012 ~ 78190290 (+)
G1495346 NA other downstream 296974 81293440 ~ 81293926 (+)
G1495362 NA other downstream 340551 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 435745 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 832266 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1166740 82163138 ~ 82169750 (+)

Expression


Co-expression Network