G1494778



Basic Information


Item Value
gene id G1494778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81026588 ~ 81026979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1708809
CCCTGACTTGCTGTTCCTTGTGGTCTGGCCCAAGGCTTTGTTTCCCCCCTGACTTGCTGTTCCTTGTGGTCTGGCCCAAGGCTTTGTTTCCCCCCTGACTTGCTGTTCCTTGTGGTCTGGCCCGAGGCTTTGTTTCCCCCCTGACTTGCTGTTCCTTGTGGTCTGGCCCGAGGCTTTGTTTCCCCCCTGGAAGAAAAAGCACAACACCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1708809 True 210 lncRNA 0.57 2 81026588 81026979

Neighbor


gene id symbol gene type direction distance location
LOC110494687 LOC106566053 coding upstream 11598 81008457 ~ 81014990 (+)
lmod1b LOC106566054 coding upstream 21853 80997864 ~ 81004735 (+)
LOC110494685 LOC106566055 coding upstream 33061 80983250 ~ 80993527 (+)
LOC110493271 LOC106566056 coding upstream 48149 80947799 ~ 80978439 (+)
LOC110494684 LOC107554191 coding upstream 88860 80892208 ~ 80937728 (+)
LOC110494691 LOC106566048 coding downstream 257107 81284086 ~ 81313260 (+)
LOC110494692 LOC106566047 coding downstream 296588 81323567 ~ 81335099 (+)
LOC110494694 LOC106566046 coding downstream 347554 81374533 ~ 81380787 (+)
LOC118940108 NA coding downstream 365723 81392702 ~ 81393600 (+)
LOC110494696 LOC106582736 coding downstream 405209 81432188 ~ 81602161 (+)
G1494744 NA non-coding upstream 30122 80995056 ~ 80996466 (+)
G1494745 NA non-coding upstream 31712 80994441 ~ 80994876 (+)
G1494749 NA non-coding upstream 46076 80979610 ~ 80980512 (+)
G1494724 NA non-coding upstream 129268 80897081 ~ 80897320 (+)
G1494634 NA non-coding upstream 142907 80882464 ~ 80883681 (+)
G1494784 NA non-coding downstream 11836 81038815 ~ 81039760 (+)
G1494769 NA non-coding downstream 18580 81045559 ~ 81045798 (+)
G1494792 NA non-coding downstream 28227 81055206 ~ 81055428 (+)
G1494793 NA non-coding downstream 29001 81055980 ~ 81056188 (+)
G1494794 NA non-coding downstream 30688 81057667 ~ 81057896 (+)
tusc2 tusc2 other upstream 1641151 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1690516 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2250861 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2773280 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2836298 78189012 ~ 78190290 (+)
G1495346 NA other downstream 266461 81293440 ~ 81293926 (+)
G1495362 NA other downstream 310038 81337017 ~ 81338163 (+)
LOC110494698 LOC106566043 other downstream 801753 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1136227 82163138 ~ 82169750 (+)

Expression



Co-expression Network