Gene
RNA
| Item | Value |
|---|---|
| gene id | G1494784 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 81038815 ~ 81039760 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1708816 | True | 902 | lncRNA | 0.48 | 2 | 81038815 | 81039760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494687 | LOC106566053 | coding | upstream | 23825 | 81008457 ~ 81014990 (+) |
| lmod1b | LOC106566054 | coding | upstream | 34080 | 80997864 ~ 81004735 (+) |
| LOC110494685 | LOC106566055 | coding | upstream | 45288 | 80983250 ~ 80993527 (+) |
| LOC110493271 | LOC106566056 | coding | upstream | 60376 | 80947799 ~ 80978439 (+) |
| LOC110494684 | LOC107554191 | coding | upstream | 101087 | 80892208 ~ 80937728 (+) |
| LOC110494691 | LOC106566048 | coding | downstream | 244326 | 81284086 ~ 81313260 (+) |
| LOC110494692 | LOC106566047 | coding | downstream | 283807 | 81323567 ~ 81335099 (+) |
| LOC110494694 | LOC106566046 | coding | downstream | 334773 | 81374533 ~ 81380787 (+) |
| LOC118940108 | NA | coding | downstream | 352942 | 81392702 ~ 81393600 (+) |
| LOC110494696 | LOC106582736 | coding | downstream | 392428 | 81432188 ~ 81602161 (+) |
| G1494778 | NA | non-coding | upstream | 11836 | 81026588 ~ 81026979 (+) |
| G1494744 | NA | non-coding | upstream | 42349 | 80995056 ~ 80996466 (+) |
| G1494745 | NA | non-coding | upstream | 43939 | 80994441 ~ 80994876 (+) |
| G1494749 | NA | non-coding | upstream | 58303 | 80979610 ~ 80980512 (+) |
| G1494724 | NA | non-coding | upstream | 141495 | 80897081 ~ 80897320 (+) |
| G1494769 | NA | non-coding | downstream | 5799 | 81045559 ~ 81045798 (+) |
| G1494792 | NA | non-coding | downstream | 15446 | 81055206 ~ 81055428 (+) |
| G1494793 | NA | non-coding | downstream | 16220 | 81055980 ~ 81056188 (+) |
| G1494794 | NA | non-coding | downstream | 17907 | 81057667 ~ 81057896 (+) |
| G1494800 | NA | non-coding | downstream | 23385 | 81063145 ~ 81063384 (+) |
| tusc2 | tusc2 | other | upstream | 1653378 | 79382417 ~ 79387551 (+) |
| LOC110493267 | LOC106565976 | other | upstream | 1702743 | 79321093 ~ 79336076 (+) |
| G1492310 | NA | other | upstream | 2263088 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 2785507 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 2848525 | 78189012 ~ 78190290 (+) |
| G1495346 | NA | other | downstream | 253680 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 297257 | 81337017 ~ 81338163 (+) |
| LOC110494698 | LOC106566043 | other | downstream | 788972 | 81828571 ~ 81847540 (+) |
| G1496351 | LOC106566032 | other | downstream | 1123446 | 82163138 ~ 82169750 (+) |
