G1494769


Basic Information

Item Value
gene id G1494769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81045559 ~ 81045798 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708800
tacttgcacatcctcatctgcacatctatcactccagtgtaaattgtaattactttgtcactatggcctatttattgccttacctccttacttcaattgcacacactgtatacagatttttctattgtgttattgactgtacgtttgtttgtcccatgtgtaactctgtgttgttttttgctttatcttggccaggtcgcagctgtaaatgagaacttgttctcaactggcctacctgct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708800 True 240 lncRNA 0.39 1 81045559 81045798

Neighbor

gene id symbol gene type direction distance location
LOC110494688 LOC106566052 coding upstream 2940 81018030 ~ 81042619 (+)
LOC110494687 LOC106566053 coding upstream 30569 81008457 ~ 81014990 (+)
lmod1b LOC106566054 coding upstream 40824 80997864 ~ 81004735 (+)
LOC110494685 LOC106566055 coding upstream 52032 80983250 ~ 80993527 (+)
LOC110493271 LOC106566056 coding upstream 67120 80947799 ~ 80978439 (+)
LOC110494691 LOC106566048 coding downstream 238288 81284086 ~ 81313260 (+)
LOC110494692 LOC106566047 coding downstream 277769 81323567 ~ 81335099 (+)
LOC110494694 LOC106566046 coding downstream 328735 81374533 ~ 81380787 (+)
LOC118940108 NA coding downstream 346904 81392702 ~ 81393600 (+)
LOC110494696 LOC106582736 coding downstream 386390 81432188 ~ 81602161 (+)
G1494784 NA non-coding upstream 5799 81038815 ~ 81039760 (+)
G1494778 NA non-coding upstream 18580 81026588 ~ 81026979 (+)
G1494744 NA non-coding upstream 49093 80995056 ~ 80996466 (+)
G1494745 NA non-coding upstream 50683 80994441 ~ 80994876 (+)
G1494749 NA non-coding upstream 65047 80979610 ~ 80980512 (+)
G1494792 NA non-coding downstream 9408 81055206 ~ 81055428 (+)
G1494793 NA non-coding downstream 10182 81055980 ~ 81056188 (+)
G1494794 NA non-coding downstream 11869 81057667 ~ 81057896 (+)
G1494800 NA non-coding downstream 17347 81063145 ~ 81063384 (+)
G1494805 NA non-coding downstream 26486 81072284 ~ 81072653 (+)
tusc2 tusc2 other upstream 1660122 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1709487 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2269832 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2792251 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2855269 78189012 ~ 78190290 (+)
G1495346 NA other downstream 247642 81293440 ~ 81293926 (+)
G1495362 NA other downstream 291219 81337017 ~ 81338163 (+)
LOC110494698 LOC106566043 other downstream 782934 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1117408 82163138 ~ 82169750 (+)

Expression


Co-expression Network