Gene
RNA
| Item | Value |
|---|---|
| gene id | G1494794 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 81057667 ~ 81057896 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1708826 | True | 230 | lncRNA | 0.44 | 1 | 81057667 | 81057896 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494688 | LOC106566052 | coding | upstream | 15048 | 81018030 ~ 81042619 (+) |
| LOC110494687 | LOC106566053 | coding | upstream | 42677 | 81008457 ~ 81014990 (+) |
| lmod1b | LOC106566054 | coding | upstream | 52932 | 80997864 ~ 81004735 (+) |
| LOC110494685 | LOC106566055 | coding | upstream | 64140 | 80983250 ~ 80993527 (+) |
| LOC110493271 | LOC106566056 | coding | upstream | 79228 | 80947799 ~ 80978439 (+) |
| LOC110494691 | LOC106566048 | coding | downstream | 226190 | 81284086 ~ 81313260 (+) |
| LOC110494692 | LOC106566047 | coding | downstream | 265671 | 81323567 ~ 81335099 (+) |
| LOC110494694 | LOC106566046 | coding | downstream | 316637 | 81374533 ~ 81380787 (+) |
| LOC118940108 | NA | coding | downstream | 334806 | 81392702 ~ 81393600 (+) |
| LOC110494696 | LOC106582736 | coding | downstream | 374292 | 81432188 ~ 81602161 (+) |
| G1494793 | NA | non-coding | upstream | 1479 | 81055980 ~ 81056188 (+) |
| G1494792 | NA | non-coding | upstream | 2239 | 81055206 ~ 81055428 (+) |
| G1494769 | NA | non-coding | upstream | 11869 | 81045559 ~ 81045798 (+) |
| G1494784 | NA | non-coding | upstream | 17907 | 81038815 ~ 81039760 (+) |
| G1494778 | NA | non-coding | upstream | 30688 | 81026588 ~ 81026979 (+) |
| G1494800 | NA | non-coding | downstream | 5249 | 81063145 ~ 81063384 (+) |
| G1494805 | NA | non-coding | downstream | 14388 | 81072284 ~ 81072653 (+) |
| G1494806 | NA | non-coding | downstream | 15279 | 81073175 ~ 81073395 (+) |
| G1494814 | NA | non-coding | downstream | 28122 | 81086018 ~ 81086298 (+) |
| G1494817 | NA | non-coding | downstream | 32749 | 81090645 ~ 81092930 (+) |
| tusc2 | tusc2 | other | upstream | 1672230 | 79382417 ~ 79387551 (+) |
| LOC110493267 | LOC106565976 | other | upstream | 1721595 | 79321093 ~ 79336076 (+) |
| G1492310 | NA | other | upstream | 2281940 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 2804359 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 2867377 | 78189012 ~ 78190290 (+) |
| G1495346 | NA | other | downstream | 235544 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 279121 | 81337017 ~ 81338163 (+) |
| LOC110494698 | LOC106566043 | other | downstream | 770836 | 81828571 ~ 81847540 (+) |
| G1496351 | LOC106566032 | other | downstream | 1105310 | 82163138 ~ 82169750 (+) |
