G1494800


Basic Information

Item Value
gene id G1494800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81063145 ~ 81063384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1708832
tagcacgcgctccagcaggtgtatctcactgatcatccctaaagccaacacctcatttggccgcctttccttccagttctgtgctgcctgtgactggaacgaattgcacaaatcgctgaagttggagacttttatctccctcaccaactttaaacatctgctatctgagcagctaaccgatcgctgcagctgtacatagtccatcggtctatagcccacccaatttacctacctcatccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1708832 True 240 lncRNA 0.50 1 81063145 81063384

Neighbor

gene id symbol gene type direction distance location
LOC110494688 LOC106566052 coding upstream 20526 81018030 ~ 81042619 (+)
LOC110494687 LOC106566053 coding upstream 48155 81008457 ~ 81014990 (+)
lmod1b LOC106566054 coding upstream 58410 80997864 ~ 81004735 (+)
LOC110494685 LOC106566055 coding upstream 69618 80983250 ~ 80993527 (+)
LOC110493271 LOC106566056 coding upstream 84706 80947799 ~ 80978439 (+)
LOC110494691 LOC106566048 coding downstream 220702 81284086 ~ 81313260 (+)
LOC110494692 LOC106566047 coding downstream 260183 81323567 ~ 81335099 (+)
LOC110494694 LOC106566046 coding downstream 311149 81374533 ~ 81380787 (+)
LOC118940108 NA coding downstream 329318 81392702 ~ 81393600 (+)
LOC110494696 LOC106582736 coding downstream 368804 81432188 ~ 81602161 (+)
G1494794 NA non-coding upstream 5249 81057667 ~ 81057896 (+)
G1494793 NA non-coding upstream 6957 81055980 ~ 81056188 (+)
G1494792 NA non-coding upstream 7717 81055206 ~ 81055428 (+)
G1494769 NA non-coding upstream 17347 81045559 ~ 81045798 (+)
G1494784 NA non-coding upstream 23385 81038815 ~ 81039760 (+)
G1494805 NA non-coding downstream 8900 81072284 ~ 81072653 (+)
G1494806 NA non-coding downstream 9791 81073175 ~ 81073395 (+)
G1494814 NA non-coding downstream 22634 81086018 ~ 81086298 (+)
G1494817 NA non-coding downstream 27261 81090645 ~ 81092930 (+)
G1495135 NA non-coding downstream 42059 81105443 ~ 81105673 (+)
tusc2 tusc2 other upstream 1677708 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1727073 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2287418 78770747 ~ 78775727 (+)
G1492003 NA other upstream 2809837 78252629 ~ 78253308 (+)
G1491963 NA other upstream 2872855 78189012 ~ 78190290 (+)
G1495346 NA other downstream 230056 81293440 ~ 81293926 (+)
G1495362 NA other downstream 273633 81337017 ~ 81338163 (+)
LOC110494698 LOC106566043 other downstream 765348 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 1099822 82163138 ~ 82169750 (+)

Expression


Co-expression Network