Gene
RNA
| Item | Value |
|---|---|
| gene id | G1495181 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 81200888 ~ 81201097 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: GATA-binding factor 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1709268 | True | 210 | lncRNA | 0.41 | 1 | 81200888 | 81201097 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494688 | LOC106566052 | coding | upstream | 158269 | 81018030 ~ 81042619 (+) |
| LOC110494687 | LOC106566053 | coding | upstream | 185898 | 81008457 ~ 81014990 (+) |
| lmod1b | LOC106566054 | coding | upstream | 196153 | 80997864 ~ 81004735 (+) |
| LOC110494685 | LOC106566055 | coding | upstream | 207361 | 80983250 ~ 80993527 (+) |
| LOC110493271 | LOC106566056 | coding | upstream | 222449 | 80947799 ~ 80978439 (+) |
| LOC110494691 | LOC106566048 | coding | downstream | 82989 | 81284086 ~ 81313260 (+) |
| LOC110494692 | LOC106566047 | coding | downstream | 122470 | 81323567 ~ 81335099 (+) |
| LOC110494694 | LOC106566046 | coding | downstream | 173436 | 81374533 ~ 81380787 (+) |
| LOC118940108 | NA | coding | downstream | 191605 | 81392702 ~ 81393600 (+) |
| LOC110494696 | LOC106582736 | coding | downstream | 231091 | 81432188 ~ 81602161 (+) |
| G1495174 | NA | non-coding | upstream | 10775 | 81189885 ~ 81190113 (+) |
| G1495169 | NA | non-coding | upstream | 23299 | 81177365 ~ 81177589 (+) |
| G1495164 | NA | non-coding | upstream | 29944 | 81170520 ~ 81170944 (+) |
| G1495161 | NA | non-coding | upstream | 37187 | 81163483 ~ 81163701 (+) |
| G1495157 | NA | non-coding | upstream | 48842 | 81151506 ~ 81152046 (+) |
| G1495343 | NA | non-coding | downstream | 87602 | 81288699 ~ 81288918 (+) |
| G1495349 | LOC106562530 | non-coding | downstream | 94750 | 81295847 ~ 81296593 (+) |
| G1495350 | LOC100380853 | non-coding | downstream | 95525 | 81296622 ~ 81297064 (+) |
| G1495355 | NA | non-coding | downstream | 106467 | 81307564 ~ 81307832 (+) |
| G1495356 | NA | non-coding | downstream | 106781 | 81307878 ~ 81308166 (+) |
| tusc2 | tusc2 | other | upstream | 1815451 | 79382417 ~ 79387551 (+) |
| LOC110493267 | LOC106565976 | other | upstream | 1864816 | 79321093 ~ 79336076 (+) |
| G1492310 | NA | other | upstream | 2425161 | 78770747 ~ 78775727 (+) |
| G1492003 | NA | other | upstream | 2947580 | 78252629 ~ 78253308 (+) |
| G1491963 | NA | other | upstream | 3010598 | 78189012 ~ 78190290 (+) |
| G1495346 | NA | other | downstream | 92343 | 81293440 ~ 81293926 (+) |
| G1495362 | NA | other | downstream | 135920 | 81337017 ~ 81338163 (+) |
| LOC110494698 | LOC106566043 | other | downstream | 627635 | 81828571 ~ 81847540 (+) |
| G1496351 | LOC106566032 | other | downstream | 962109 | 82163138 ~ 82169750 (+) |
