G1495538 (LOC106566048)


Basic Information

Item Value
gene id G1495538
gene name LOC106566048
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81311747 ~ 81314315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1709656
ACAAATATAATGTACATCTTGTACATCAAACATGTCAATATATACatgaatataaaatattattgaaacaatTGATTTTCAGGACAAACTGTACTTCATTAATCACTTAAATGTAGTTAAATATTGCGAAAATACTACGTTTCCCAGAATGCATTAGTTTATCCATCAAGTTGACCCTGAGGCCTTCAAAAAGAAGCCAAACAAATGAAATGCTTGGTGGAAATATAATTGGCTATTCTAAGCATAGAGGTGAAGAAAGTATATGAACACTGTTTCCAGAGAAAAGTGAAATATTATTTGGTATCTGGAAATGTGACCTGTCAGATTCAATGAAACTCTCATGTTCTATGACTGAGTGGAATTTCTTTGAATTGTACTGAATTAAATTCCACTTCCTGTCACTCCCTCAAATTCTACATCTTGTGGCCAATTAAATTTCAATTTCAACTCATGAGTTGAATGGGAGTCAGTTCCATCATtctgaattgagcccaaccctgatGATAAgtagtgcagagagagagatttgattGGCCCATGACTGTACGCCGTAACTGACATGCATTTTTGCCTGTTTTTCACCATTTTACTGAATAAACttatgctattattattattattattattattatttcttattgttgttattttatttattacgATTCAGAAAGCAAAAAATGGATACGTACAAAtatatctacactgagtgtacaaaacattaggaacacctgctcattccatgacatagactgaccaggtgaatccatgttaaagctatgatcccttattgatgtcacttgttaaattcacttaaATTAGTGtacatgaaggggaggagacaggttaaagcagGATGTtttagccttgagacaattgagacatgaacagggtgaatgggcaagacaaaaggtttaggtgcctttgaacggggtacaagaactgcaacgctgctgggtttttcacgctcaaatgtttcccgtgtgtatcaacaatggtccaaaggacatccagtcaacttgacacaactgtgggaagcattggagccaacatggccagcatccctgtggaacgctttctgcaccttgtagagtccatgtcccaacaaattgagactgttctgagggctaaaagagggtgcaactcaatattaggaaggtgttcctaatgtttttccAACTAGGTGTATAGTGCTATAGTAGAATGAAACAGACCAAAAAATTCCAATAAAGTTAACTTGACAGTGCTTTGGAGCATCTCTCTGCATACAAACATGTGAGCAGTATAAGAGAACACAGCGCTAGTAGCACCCAGTAGCAGGCTAGACTAGCTGGTGGAGGACACCACCATATCCAGCTCTTTAACATTCTCCTGGCACCTGGTGAGACCACAGCTTCCAGACAGCTCAGGGAAGTGGTTGGCTCTGGTACCAGGGATGGGCGACGCTGGAGACTGGGCCAGGGCAGGCTTCTTAGGGGGGATGGGGGGCGGGTTGCCCCTCTCTGCTCGGGGAATGGTAGGTGAGCGGACCCCCAGAGGCAGAGCAGCACCAGAGGCCCTGGGGATTACCGGGGAGGAGGGGGACAGGTTACGGTAGTCAGTGCCAAAGGGAGAACTGTTGGGTGGCGGAGGTTTGGCCCCCTGCTGGACTGTGAAGCGGGACAGGACCTGGGTGACGGTGCTGCGGGCCAGCTGCTTGGCCGGGCtgtggacagggacagagacgggCTCAGGGGATGGGCTAGGGGTTGGGGACAGGTCTCTGGGGGAGTGAGGCAGGCtaccaccccctcctccaccctgctgctgctgttgctgctctgGGTCAGTGTGGCCCTGAAACTTGTGGCGAGCAGCATGGAAGCGATGGTTGATGCCTACCTGGTAGGAGGACTGGTAGCTGGGGCTGGTGGCCAGCTGAGGAGAGGAGCATGGGGAGGAGGTGACAGAGGAGGTCCCTGTGCTGCAGAGGGATATAATTTTGGTAAGGAGGGCAGGGGACCCAAGAACAGAGCTGCTGTTCTCACTCCAGTTGTCCTGGCCCAATCCGTATGGAAGGGATGGCACCTGCTCCTCCGTGGGGCAGTCATGGTGCCCGTTGACTTTAGGTTCCTCAGTCTCGCCCCCTTCTGCCTGGCTGGGTTGTGGGTCCACAGgatattctctcctctcctcctcatctcccctctctccctgcagctCTCTCTTCAGGGCCTCCACCTGCTCCTGCAGCTGGCAGTACTGGGCCTCCTCTTTCTTGAGCCGGGAGCGGAGCTGCTCCCTCTCCGTATCGAACTCAGCCAGCTGCTCCTCCACCCTGGCCTCCATCTGcagggccctcctcctctcctcctgcagctCAGCCCTCAGGGCAAGGACTTCCCCCTGCTCCTTCTCCAGCCTACGGCCTGCCTCAGCCAGGCGGTGGCCCTCCTCCAGGGCCCGCTGGCTGGCCCACTTGCACTCCTTGGCCAGGGCAGAGGAGAGCTGCTTGTGCTGCACCCGCTCCTCCTCCAGCTGCTCCAGGACCTTCTTCTGTTCCTTCTCCAGACGACACAACTGGCCTCGCTCA

Function

NR:

description
CTTNBP2 N-terminal-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1709656 True 2569 TUCP 0.50 1 81311747 81314315

Neighbor

gene id symbol gene type direction distance location
LOC110494690 LOC106566049 coding downstream 73118 81115867 ~ 81238629 (-)
LOC110494689 LOC106566051 coding downstream 207805 81090497 ~ 81103942 (-)
LOC100135925 LOC106566059 coding downstream 422916 80887457 ~ 80888831 (-)
LOC110494680 LOC105023696 coding downstream 426881 80882453 ~ 80884866 (-)
LOC110494672 LOC100380672 coding downstream 429503 80868129 ~ 80882244 (-)
LOC110494693 LOC106566045 coding upstream 27882 81342197 ~ 81374548 (-)
LOC110494695 ppm1h coding upstream 81755 81396070 ~ 81420330 (-)
LOC118940159 LOC106565892 coding upstream 166967 81481282 ~ 81488954 (-)
LOC110494699 LOC106566041 coding upstream 556759 81871074 ~ 81887569 (-)
LOC110494702 LOC106566039 coding upstream 599232 81913547 ~ 81926173 (-)
G1495536 NA non-coding downstream 1333 81309999 ~ 81310414 (-)
G1495534 NA non-coding downstream 4247 81307262 ~ 81307500 (-)
G1495533 NA non-coding downstream 7902 81303403 ~ 81303845 (-)
G1495529 NA non-coding downstream 15917 81295624 ~ 81295830 (-)
G1495528 NA non-coding downstream 16876 81294658 ~ 81294871 (-)
G1495537 NA non-coding upstream 1355 81315670 ~ 81316768 (-)
G1495539 NA non-coding upstream 2620 81316935 ~ 81317491 (-)
G1495540 NA non-coding upstream 3181 81317496 ~ 81317707 (-)
G1495556 NA non-coding upstream 19164 81333479 ~ 81338469 (-)
G1495542 LOC106566046 non-coding upstream 63816 81378131 ~ 81380670 (-)
G1495222 NA other downstream 196509 81110445 ~ 81115238 (-)
G1495113 NA other downstream 245065 81065971 ~ 81066682 (-)
G1495003 NA other downstream 416310 80895088 ~ 80895437 (-)
G1494924 NA other downstream 617645 80692422 ~ 80694102 (-)
G1495552 NA other upstream 12370 81326685 ~ 81327113 (-)
G1496390 NA other upstream 858154 82172469 ~ 82174852 (-)
G1496689 NA other upstream 920813 82235128 ~ 82245987 (-)
G1496921 NA other upstream 1340157 82629246 ~ 82661638 (-)
G1498077 NA other upstream 2290928 83605243 ~ 83605753 (-)

Expression


Co-expression Network