G1495338


Basic Information

Item Value
gene id G1495338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81315532 ~ 81316750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1709438
tTTTCACAACtgcacagtattattccaacctcagtgtggaaatatacactgtaaatacaaaagtatgtggacaccccttcaaaggagtggatttggctatttcagccacacccgttgctgacaggagtaaagatggtctgtcctcggttgcaacactcactaccgagttccaaactgcctctggaagcaacgtcagcacaataactgtttgtcgggagcttgaaatgggtttccatagctgAGCAGCCGCaaacaagtctaagatcaccatgcgcaatgcaaaGCGTCGGCTGAAgtagtgtaaagctcaccaccattggactctggagcagtggaaatgcattctctggagtgatggatcacgcttcaccatctggcagtcagacagatgaatctgggtttggcgaatgccaggaggacaatacctgccccaatgcatagtgccaactgtaacagTTGGTGGaagaagaataatggtctggggctgtttttcatggttcgagcttggccccttagttccagtgaaggaaaatcttaacgctacagcatacaataacattctagataattctgtgcttccaactttgtggcaacagtttggagaaggccctttcctgtttcagcatgacagtgtccctgtgcacaaagcgaggtccatacagaaattgtttgttgagatcggtgtgtaagaacttgactggtctgcacagagccctgacctcaaccccatcgaacacctttgggatgaattggaaagccgactgcagccaggcctaatcgcccaacatcagtgcccgacctcactaatgctcttgtgactgaatcgaagcaagtcccctcatttagtggaaagacttcccagaagagtggaggaggctgttatagcagcaaagggggaaccaactccatattaatgcccatgattttggaatgagatgtttgacaagcaggtactttttggccatgtagtgtatgtatacACAGCGCAATTCACAGCACAATTCTATTTTACAGTGCTCAGATTATTATGTATTGTACTGCATTGCATAACCTTTTAAACTTCCATGCATATGATTGAATGTTAATGTTTTTTTATACCATGCTAATCATGTGATTTGTTACAGTATTATCCATGATGGATATAAAATGAGTCCGCTCACTTCCCGCCCTCACTGTATCTATTTATATATCGATTGATCAATAACCATGGTCTGGTAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1709438 True 1219 lncRNA 0.44 1 81315532 81316750

Neighbor

gene id symbol gene type direction distance location
LOC110494691 LOC106566048 coding upstream 2272 81284086 ~ 81313260 (+)
LOC110494688 LOC106566052 coding upstream 272913 81018030 ~ 81042619 (+)
LOC110494687 LOC106566053 coding upstream 300542 81008457 ~ 81014990 (+)
lmod1b LOC106566054 coding upstream 310797 80997864 ~ 81004735 (+)
LOC110494685 LOC106566055 coding upstream 322005 80983250 ~ 80993527 (+)
LOC110494692 LOC106566047 coding downstream 6817 81323567 ~ 81335099 (+)
LOC110494694 LOC106566046 coding downstream 57783 81374533 ~ 81380787 (+)
LOC118940108 NA coding downstream 75952 81392702 ~ 81393600 (+)
LOC110494696 LOC106582736 coding downstream 115438 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 coding downstream 511821 81828571 ~ 81847540 (+)
G1495356 NA non-coding upstream 7366 81307878 ~ 81308166 (+)
G1495355 NA non-coding upstream 7700 81307564 ~ 81307832 (+)
G1495350 LOC100380853 non-coding upstream 18468 81296622 ~ 81297064 (+)
G1495349 LOC106562530 non-coding upstream 18939 81295847 ~ 81296593 (+)
G1495343 NA non-coding upstream 26614 81288699 ~ 81288918 (+)
G1495359 NA non-coding downstream 3063 81319813 ~ 81320091 (+)
G1495363 NA non-coding downstream 18445 81335195 ~ 81336268 (+)
G1495372 NA non-coding downstream 25377 81342127 ~ 81344561 (+)
G1495408 LOC106586415 non-coding downstream 107728 81424478 ~ 81424709 (+)
G1495409 NA non-coding downstream 108295 81425045 ~ 81425329 (+)
G1495346 NA other upstream 21606 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 1930095 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 1979460 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2539805 78770747 ~ 78775727 (+)
G1492003 NA other upstream 3062224 78252629 ~ 78253308 (+)
G1495362 NA other downstream 20267 81337017 ~ 81338163 (+)
G1496351 LOC106566032 other downstream 846456 82163138 ~ 82169750 (+)
G1497918 NA other downstream 2297515 83614265 ~ 83634495 (+)

Expression


Co-expression Network