G1495537


Basic Information

Item Value
gene id G1495537
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81315670 ~ 81316768 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1709655
TTTTAATGTGCGTTGGAAACTACCAGACCATGGTTATTGATCAATCGATATATAAATAGATACAGTGAGGGCGGGAAGTGAGCGGACTCATTTTATATCCATCATGGATAATACTGTAACAAATCACATGATTAGCATGGTATAAAAAAACATTAACATTCAATCATATGCATGGAAGTTTAAAAGGTTATGCAATGCAGTACAATACATAATAATCTGAGCACTGTAAAATAGAATTGTGCTGTGAATTGCGCTGTgtatacatacactacatggccaaaaagtacctgcttgtcaaacatctcattccaaaatcatgggcattaatatggagttggttccccctttgctgctataacagcctcctccactcttctgggaagtctttccactaaatgaggggacttgcttcgattcagtcacaagagcattagtgaggtcgggcactgatgttgggcgattaggcctggctgcagtcggctttccaattcatcccaaaggtgttcgatggggttgaggtcagggctctgtgcagaccagtcaagttcttacacaccgatctcaacaaacaatttctgtatggacctcgctttgtgcacagggacactgtcatgctgaaacaggaaagggccttctccaaactgttgccacaaagttggaagcacagaattatctagaatgttattgtatgctgtagcgttaagattttccttcactggaactaaggggccaagctcgaaccatgaaaaacagccccagaccattattcttcttCCACCAActgttacagttggcactatgcattggggcaggtattgtcctcctggcattcgccaaacccagattcatctgtctgactgccagatggtgaagcgtgatccatcactccagagaatgcatttccactgctccagagtccaatggtggtgagctttacactacTTCAGCCGACGCtttgcattgcgcatggtgatcttagacttgtttGCGGCTGCTcagctatggaaacccatttcaagctcccgacaaacagttattgtgctgacgttgcttccagaggcagtttggaactcggtagtgagtgttgcaaccgaggaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1709655 True 1099 lncRNA 0.45 1 81315670 81316768

Neighbor

gene id symbol gene type direction distance location
LOC110494690 LOC106566049 coding downstream 77041 81115867 ~ 81238629 (-)
LOC110494689 LOC106566051 coding downstream 211728 81090497 ~ 81103942 (-)
LOC100135925 LOC106566059 coding downstream 426839 80887457 ~ 80888831 (-)
LOC110494680 LOC105023696 coding downstream 430804 80882453 ~ 80884866 (-)
LOC110494672 LOC100380672 coding downstream 433426 80868129 ~ 80882244 (-)
LOC110494693 LOC106566045 coding upstream 25429 81342197 ~ 81374548 (-)
LOC110494695 ppm1h coding upstream 79302 81396070 ~ 81420330 (-)
LOC118940159 LOC106565892 coding upstream 164514 81481282 ~ 81488954 (-)
LOC110494699 LOC106566041 coding upstream 554306 81871074 ~ 81887569 (-)
LOC110494702 LOC106566039 coding upstream 596779 81913547 ~ 81926173 (-)
G1495536 NA non-coding downstream 5256 81309999 ~ 81310414 (-)
G1495534 NA non-coding downstream 8170 81307262 ~ 81307500 (-)
G1495533 NA non-coding downstream 11825 81303403 ~ 81303845 (-)
G1495529 NA non-coding downstream 19840 81295624 ~ 81295830 (-)
G1495528 NA non-coding downstream 20799 81294658 ~ 81294871 (-)
G1495539 NA non-coding upstream 167 81316935 ~ 81317491 (-)
G1495540 NA non-coding upstream 728 81317496 ~ 81317707 (-)
G1495556 NA non-coding upstream 16711 81333479 ~ 81338469 (-)
G1495542 LOC106566046 non-coding upstream 61363 81378131 ~ 81380670 (-)
G1495591 NA non-coding upstream 106482 81423250 ~ 81423498 (-)
G1495538 LOC106566048 other downstream 1355 81311747 ~ 81314315 (-)
G1495222 NA other downstream 200432 81110445 ~ 81115238 (-)
G1495113 NA other downstream 248988 81065971 ~ 81066682 (-)
G1495003 NA other downstream 420233 80895088 ~ 80895437 (-)
G1495552 NA other upstream 9917 81326685 ~ 81327113 (-)
G1496390 NA other upstream 855701 82172469 ~ 82174852 (-)
G1496689 NA other upstream 918360 82235128 ~ 82245987 (-)
G1496921 NA other upstream 1337704 82629246 ~ 82661638 (-)
G1498077 NA other upstream 2288475 83605243 ~ 83605753 (-)

Expression


Co-expression Network