G1495362


Basic Information

Item Value
gene id G1495362
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81337017 ~ 81338163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1709462
cttgagatgtttctacaacttgattggaatccagtTGTGGTAAatgaaattgattggacatgattgggaAAGGCTCGCACCTGTCTATATATCTGACatgcacagttgacagtgcaaaaaaaaaacagctctGAGGTTGAAAGAATTGTCCGCAGGATTTTGTcgcggcacagatctggggaataccaaaaaatgtctgcagtattgaaggtccccaagaacatagtgacctccatcattcttaaatggaagaagtttggagccaccaagCCTCTTTCTAgggctggccgcctggccaaactgagcaatcaagggagtgggccatggtcagggaggtgaccatcaacccaatggtcactctgacagagctccagagttcctctgtggagatgggagaaccttccagaaggacaaccatctctgcagcactccaccaatcagacctttatggtagagtggacagatggaagccactcctcagaaaaagacacatgacagcccgcttgaagtttgccaaaaggcacctaaaggactctcagacaatgagaaacaagaatctctggactgatgaaaccaagattgaactctttggcctgaatgccaagtgtcacatctgtaGAAAACCTgacaccattcctacggtgatgcatggtggtgccagcatcatgctttgaggatgtttttcagctgcagggactgggagactaatcagaatgaagggaaagatgaatggagcaaagtacagagatatccttgatgaaaacctgctccagggcggtcaggacctcagactggggcgaaggttcaccttccaactggacaacaaccctaagcacacagccaagacaagtttctgaatgtccttgagtggcccagccagagcacggacttgaacccgatcaaacatctctggagacatctgaaaatagctgtgcaacctgtcaaagcttgagaggatctgcagagaagaatgggagaaactccccaaatacagatgtgccaagtttTAAGGTCGTACTCAAgaacactcaaggctgtaattgctgccaaaggtgcttcaacaaagtactgagtaaaggtgtctaaatacttatgtaaatgtgatatttcaggtttttatttgtaatacatttgcaaaaaattctaa

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1709462 True 1147 TUCP 0.46 1 81337017 81338163

Neighbor

gene id symbol gene type direction distance location
LOC110494692 LOC106566047 coding upstream 1918 81323567 ~ 81335099 (+)
LOC110494691 LOC106566048 coding upstream 23757 81284086 ~ 81313260 (+)
LOC110494688 LOC106566052 coding upstream 294398 81018030 ~ 81042619 (+)
LOC110494687 LOC106566053 coding upstream 322027 81008457 ~ 81014990 (+)
lmod1b LOC106566054 coding upstream 332282 80997864 ~ 81004735 (+)
LOC110494694 LOC106566046 coding downstream 36370 81374533 ~ 81380787 (+)
LOC118940108 NA coding downstream 54539 81392702 ~ 81393600 (+)
LOC110494696 LOC106582736 coding downstream 94025 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 coding downstream 490408 81828571 ~ 81847540 (+)
LOC118940109 NA coding downstream 523388 81861551 ~ 81862479 (+)
G1495363 NA non-coding upstream 749 81335195 ~ 81336268 (+)
G1495359 NA non-coding upstream 16926 81319813 ~ 81320091 (+)
G1495338 NA non-coding upstream 20267 81315532 ~ 81316750 (+)
G1495356 NA non-coding upstream 28851 81307878 ~ 81308166 (+)
G1495355 NA non-coding upstream 29185 81307564 ~ 81307832 (+)
G1495372 NA non-coding downstream 3964 81342127 ~ 81344561 (+)
G1495408 LOC106586415 non-coding downstream 86315 81424478 ~ 81424709 (+)
G1495409 NA non-coding downstream 86882 81425045 ~ 81425329 (+)
G1495456 NA non-coding downstream 155789 81493952 ~ 81494430 (+)
G1495417 NA non-coding downstream 264409 81602572 ~ 81603171 (+)
G1495346 NA other upstream 43091 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 1951580 79382417 ~ 79387551 (+)
LOC110493267 LOC106565976 other upstream 2000945 79321093 ~ 79336076 (+)
G1492310 NA other upstream 2561290 78770747 ~ 78775727 (+)
G1492003 NA other upstream 3083709 78252629 ~ 78253308 (+)
G1496351 LOC106566032 other downstream 825043 82163138 ~ 82169750 (+)
G1497918 NA other downstream 2276102 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 2541769 83879805 ~ 83890067 (+)

Expression


Co-expression Network