G1495648


Basic Information

Item Value
gene id G1495648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81511619 ~ 81513142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1709781
CCTTTCATCCCTCTTAGAGGAATGACAGAATCTTGATGCTATTTCCCCTTTAGCAAGCACTTTTTTCCCACAGTGAAGCCCTACATTGAGTCTTAAATAGGTTAAACTTGAAAGCATTCAAGATTTTGCAAAAACTTTTCAAACTGACATAGCATCTTCAGAGTAAAACTATATTCATGTGATAAAGAGCGTCTTAAATCATCCCACAGCACCCCCTCTCGCACCGTGAACCAACCCAACCACCAAAAAATGTAGAAATAAAGCCTTTCATGAACGAACACTTGCACTTTTAGCGGTTATCATGAGAATCTCAGTGTttcaaaagaaagaaaaaaaacaaccaaTACATaacatgagtagcctagctatagttagctacagtaggtcaaccaatacataacatgagtagcctagctatagttagctacagtaggtcaaccaatacataacatgagtagcctagctatagttagctacagtaggtcaaccaatacataacatgagtagcctagctatagttagctacagtaggtcaaccaatacataacatgagtagcctagctatagttagctacactaggtcaaccaatacatcatcatgcgtagcctagctatagttagctacagtaggtcaaccaatacatcatcatgagtagcctagctatagttagctacagtaggtcaaccaatacatcatcatgagtagcctagctatagttagctacagtaggtcaaccaatacatcatcatgagtagcctagctatagctagctacagtaggtcaaccaatacatcatcatgagtagcctagctatagttagctacagtagatcaaccaatacatcatcatgagtagcctagctatagttagctacagtaggtcaaccaatacatcatcatgagtagcctagctatagttagctacagtaggtcaaccaatacatcatcatgagtagcctagctatagttagctacactaggtcaaccaatacatcatcatgagtagcctagctatagttagctacactaggtcaaccaatacatcatcatgagtagcctagctatagttagctaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1709781 True 1076 lncRNA 0.39 2 81511619 81513142

Neighbor

gene id symbol gene type direction distance location
LOC118940159 LOC106565892 coding downstream 22665 81481282 ~ 81488954 (-)
LOC110494695 ppm1h coding downstream 91289 81396070 ~ 81420330 (-)
LOC110494693 LOC106566045 coding downstream 137071 81342197 ~ 81374548 (-)
LOC110494690 LOC106566049 coding downstream 272990 81115867 ~ 81238629 (-)
LOC110494689 LOC106566051 coding downstream 407677 81090497 ~ 81103942 (-)
LOC110494699 LOC106566041 coding upstream 357932 81871074 ~ 81887569 (-)
LOC110494702 LOC106566039 coding upstream 400405 81913547 ~ 81926173 (-)
LOC118940497 LOC106566077 coding upstream 423687 81936829 ~ 81973979 (-)
LOC118940160 NA coding upstream 473770 81986912 ~ 81988396 (-)
LOC110494709 LOC106566033 coding upstream 642891 82156033 ~ 82163096 (-)
G1495634 NA non-coding downstream 17115 81493687 ~ 81494504 (-)
G1495609 NA non-coding downstream 60402 81450527 ~ 81451217 (-)
G1495592 NA non-coding downstream 84943 81426454 ~ 81426676 (-)
G1495591 NA non-coding downstream 88121 81423250 ~ 81423498 (-)
G1495542 LOC106566046 non-coding downstream 130949 81378131 ~ 81380670 (-)
G1495688 NA non-coding upstream 89166 81602308 ~ 81602511 (-)
G1495721 NA non-coding upstream 100100 81613242 ~ 81613463 (-)
G1495726 NA non-coding upstream 103664 81616806 ~ 81617093 (-)
G1495734 NA non-coding upstream 108933 81622075 ~ 81622289 (-)
G1495889 NA non-coding upstream 145237 81658379 ~ 81698027 (-)
G1495552 NA other downstream 184506 81326685 ~ 81327113 (-)
G1495538 LOC106566048 other downstream 197304 81311747 ~ 81314315 (-)
G1495222 NA other downstream 396381 81110445 ~ 81115238 (-)
G1495113 NA other downstream 444937 81065971 ~ 81066682 (-)
G1496390 NA other upstream 659327 82172469 ~ 82174852 (-)
G1496689 NA other upstream 721986 82235128 ~ 82245987 (-)
G1496921 NA other upstream 1141330 82629246 ~ 82661638 (-)
G1498077 NA other upstream 2092101 83605243 ~ 83605753 (-)
G1498442 NA other upstream 2469199 83982341 ~ 83982894 (-)

Expression


Co-expression Network