G1496001


Basic Information

Item Value
gene id G1496001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81836615 ~ 81836892 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710172
cAGAATACTTTGTATACATtattgttgttgtctgaggctattaTCAGGGCATatgctctgggcatgtgctgaccaactggcaggtgtcttcactgacattttcaacatgtccctgattgagtctgtaataccaacatgtttcaagtagaccaccatagtccctgtgcccaagaacacaaaagcaacctgcctaaatgactacagacccgtagcactcacgtccgtagccatgaagtgctttgaaaggttggtaatggctcacatcaataccattatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710172 True 278 lncRNA 0.44 1 81836615 81836892

Neighbor

gene id symbol gene type direction distance location
LOC110494696 LOC106582736 coding upstream 234454 81432188 ~ 81602161 (+)
LOC118940108 NA coding upstream 443015 81392702 ~ 81393600 (+)
LOC110494694 LOC106566046 coding upstream 455828 81374533 ~ 81380787 (+)
LOC110494692 LOC106566047 coding upstream 501516 81323567 ~ 81335099 (+)
LOC110494691 LOC106566048 coding upstream 523355 81284086 ~ 81313260 (+)
LOC118940109 NA coding downstream 24659 81861551 ~ 81862479 (+)
LOC110494700 tshb coding downstream 53665 81890557 ~ 81892633 (+)
LOC110494701 LOC106566040 coding downstream 67876 81904768 ~ 81911784 (+)
LOC110495197 NA coding downstream 89759 81926651 ~ 81927921 (+)
LOC118940161 NA coding downstream 187175 82024067 ~ 82026625 (+)
G1495723 NA non-coding upstream 221980 81614344 ~ 81614635 (+)
G1495722 NA non-coding upstream 222761 81613552 ~ 81613854 (+)
G1495712 NA non-coding upstream 228326 81608029 ~ 81608289 (+)
G1495708 NA non-coding upstream 231079 81605316 ~ 81605536 (+)
G1495707 NA non-coding upstream 231390 81605018 ~ 81605225 (+)
G1496002 NA non-coding downstream 1179 81838071 ~ 81838288 (+)
G1496006 NA non-coding downstream 4857 81841749 ~ 81842030 (+)
LOC110494698 LOC106566043 non-coding downstream 7856 81828571 ~ 81847540 (+)
G1496010 NA non-coding downstream 12688 81849580 ~ 81849895 (+)
G1496024 NA non-coding downstream 29552 81866444 ~ 81867444 (+)
G1495362 NA other upstream 498452 81337017 ~ 81338163 (+)
G1495346 NA other upstream 542689 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 2451178 79382417 ~ 79387551 (+)
G1496351 LOC106566032 other downstream 326314 82163138 ~ 82169750 (+)
G1497918 NA other downstream 1777373 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 2043040 83879805 ~ 83890067 (+)
G1498583 NA other downstream 2288945 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2659037 84495929 ~ 84497398 (+)

Expression


Co-expression Network