G1496064 (LOC106566043)


Basic Information

Item Value
gene id G1496064
gene name LOC106566043
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81844065 ~ 81847535 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710244
gtggggatattttattttatatttaggCCAAAGTAAATAACTCTTAATGAACACAACATCccatttcagttttattttttgTGGAAAGAAAAAAAGACAATCATTGAAATATCACAAAACTATTCACATCATGGTCATCATCCATGTATGACACACATGATTAAAAGTGTCTTCGCGTGTTGACGTCAAAGTGCCTCCCTTCAAGTCGGTAATGTCTAGATTGGACCCAgcttttgaaaaatgtatgttaaaaGTAGACACTTTTTTGTGCATTTTAgataaccctaaccattttccTAATTTTAACCTAATTcccctaacctgctgcgtaattTCTCCTAGCCCTGATATGAAAAGTCAATTCTGACAAAAAGCTGGATCCCTTCAAGACCCTCCAAGTGCCCTTGAACATATGAAAATGATGAAGATGGCCAAAGATTGTCTGTTCCCTCATGGACAATCAATGCCTATCAACTTTCATTGGATCAAACGCTTGTTTTCTGCATTCACAATTATGACTTTAGTCTCATCAAGTAGGCGACATTAGTGCAACCTCAAGGTAGTTATGTCTGGAATATTTTTTAAGTTACTTAAAATTAAATCAATCAGTAACAGTGATATACAGTGTCATTTTCCAATATAACGTGCAAACAATTTCCTCCGAGATGAGGATAAACTTTCAGGAGCTCAAGAGTCATTAACGTAAGACTAAATACTGCCACCTAGAGGAGATAAATAGCTAATGGGTTAAGGCAAGAAATGTAGTAGCTGGATATTCCAATCATCCACAGGAACCGCACCCGACAGCTATCTGCAGGAGTCTTCCCCGCTAGCTGTGTTCCGGCGTCCTAGCTAGTAAGCTAACAAGCTAGCACACAGTGTCCTTCATTCCCACCTGCTAAACACCTGCCCTTGCTATTATTACCAGAACTGCGGGAAACTAGTGCATGACAGGCATGGGCGAAGTACACTGTCTACCGGTGTCCTAGCTATCGTTAACTAGCAACCTTTCTTCTGCTGCTGTGTACCGGAgtcctagctaactagctagctatcacACAGTGTTTTTTGCTCCGGCTTGCCGAACACCTGCTGGAatcctagctagctaactagttagcaCCCAGTGTCCTAAACACCTGCCGAAAACCTGCCCTTGCTGTCGTTAACAGTACTTCGGAAAAAAGTGCCCGACAGGCAGGGGAAAGTACACTGTGTACcggtgtgctagctagctacctatccCACCTACTGTGTACCGGAGTCCTAGCCTACTAACTGGCTAGCTATTACCCAGTGTCCTAAATGCCTGCCGAACAACTGCCCTCGACCTTGTTAACAGAACAGCGGGAAACTAATGCCCAACAGGCTTGGGGCGAAGGACACTGTCTAACATTACTAGCTAACTAGTTGACGTTGTCCCCCTGCCTCTTCGGCATGCATAACTACCACATACTGTACTGGAGTGCCCCCGCCTCCTGCCTGGCGGACCGGAGTCCTAGCAAAAAAAAAGACACATTTACACATAAAGAGTGGTTCCTACAGATGCAGAaatgcccacatgcaggaacgcCCCCAATTGCACCCTTCATAGTTCAAGAGTGTTGTATTGTCTTTGGTGTTGTCACAGATactgcattcaaaacaactggaaactcggaaatctccgacttcagtgcagtcaagacaactgggaaatggGAAAAAAATTAGCTCAGactgggattttttttgtttgaatggtcatccaacttggGAAAActtttattgggggggggggtacttctGGAAATGCTTGCGTAACAGACCAAGAAGACCAGGCCCGGAATGAGATGTCAGTGATAGAAGTGCAAAATTCTGTAAATGTTCTcaaaatctaaaggcacaacctagattcgagccaatgGCTAAAGTAGTTAATAttccaacctcgtgaaagtgacaaactgacacgtacatatttttttgtaaaaaacaAATTTATATTGAATTAGTGCCATTGATTTTAGGGCCTACACATTCCCATTTTGGCGCAAGACAACCGTTAGACCCGATGATGTGTTTCTATTCATGAGTTTAGCTAGCTAAAAATGTGGTCATCACTAGTTACCAGAGGCATATAGTGATAAATATGGCTAAACCCAGGCTTTTTCTGCAATTTCTATTTTTTTAATCTGAttataaacctaaccttaacccaaaccttaaccaaaACTTAAACTTAAATGAATACCAAAAAGCCCATTTTTGTTTACATAATTGTAACGATATAGCCAGGgccgcaactttcactggggacgagggggacatgtccccccccaCATTTAGAAATTGCATTTTTTTCCCTCCCTAATTTTATCATTTGAATATGATACAAAACGAGgtaacggtgtgctttaggaccatgcggaagCCTCCGAGCggttgggtaggctgtttggagtgtttatccgactggattcAAAAACTAACAATGGTAATGTCcacccccacttctaaaaccaaagttgcgcccctggatATGGCCAATTTTTGTAAATAGTGACAAGTGTGATCGGGGAATCATATTGCAGAAGCAGTTTCTGCAAGTCTTCAAACTGGATGTTGGTGTTGTTATCGGTCTCTCTAGCTTTTAGCTGTGCAGTCAACACGGGAATATAATTGTTTTGAAGATGAATTGAAGAACTGTGAATATCAAGAAACTATGCCTGATTATTCATGTAACAATGCTTTCGGAGATTAAAGAAACCTACCAATCATCATGACAGTGTGAACAAAATGTTACAGTGATTCATTAAACCTTCTAAAAGCACTAGTGCTTTCACAGAATAATACTGTACATTGTAGTTATTTGAGGTGGACTTCTGAAATTCCAAATACACTATACACATAGGAATTACCTGTATATAATAATATTCTAAAATATATCACAACACTTATGCAGAAAATGTACTATTTGGACTCCAGTAAAATATAGTATTTTTTGGTAGGGCAGTTGTACATTTCAGTAAAAAGTTGCATACATACGTGTATCTTGACACAGTCATATTATGCTGATAATACATTATTCATTGACAGAAGTGGAACTGGTGAAGAAATATGTTTACATGAACATTGCTATCTGCCAAAGACTTAAACCAAATTAATTTGAGGTCTACATTATCTCATTGACTGTATTGAGGTACCATGTGAATGCGTGAATTTGATGTCAAGGAAAGTTAGATTATGTCTTCTGCAGTTTTTGTCTCGTCAACTGCTCTCACCCTGTCATTGGTGGCTTCTTTGGAAGCATTGTCCTTGTTGGACTCTTCTTCTTTTCCCTCCAGTTTagccttcctttcctcctcctttttctcttTGTCCAACAACCGGTAGTTGGTACCCATCCCCACGAACAGGAACACACTGGCAATGATAAGGATCACCCCACAGCTCTGGTAGGTGTATTGGTAGTCATTGTAGATGTCTTTG

Function

NR:

description
monocarboxylate transporter 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710244 True 3471 lncRNA 0.41 1 81844065 81847535

Neighbor

gene id symbol gene type direction distance location
LOC118940159 LOC106565892 coding downstream 355111 81481282 ~ 81488954 (-)
LOC110494695 ppm1h coding downstream 423735 81396070 ~ 81420330 (-)
LOC110494693 LOC106566045 coding downstream 469517 81342197 ~ 81374548 (-)
LOC110494690 LOC106566049 coding downstream 605436 81115867 ~ 81238629 (-)
LOC110494689 LOC106566051 coding downstream 740123 81090497 ~ 81103942 (-)
LOC110494699 LOC106566041 coding upstream 23539 81871074 ~ 81887569 (-)
LOC110494702 LOC106566039 coding upstream 66012 81913547 ~ 81926173 (-)
LOC118940497 LOC106566077 coding upstream 89294 81936829 ~ 81973979 (-)
LOC118940160 NA coding upstream 139377 81986912 ~ 81988396 (-)
LOC110494709 LOC106566033 coding upstream 308498 82156033 ~ 82163096 (-)
G1496066 NA non-coding downstream 157 81843128 ~ 81843908 (-)
G1496059 NA non-coding downstream 5330 81838346 ~ 81838735 (-)
G1496056 NA non-coding downstream 9464 81834221 ~ 81834601 (-)
G1495990 NA non-coding downstream 20281 81823478 ~ 81823784 (-)
G1495889 NA non-coding downstream 146038 81658379 ~ 81698027 (-)
G1496070 NA non-coding upstream 3082 81850617 ~ 81850887 (-)
G1496087 NA non-coding upstream 48919 81896454 ~ 81896677 (-)
G1496284 LOC106566037 non-coding upstream 174871 82022406 ~ 82063840 (-)
G1496303 NA non-coding upstream 201063 82048598 ~ 82056759 (-)
G1496286 NA non-coding upstream 218006 82065541 ~ 82066178 (-)
G1495552 NA other downstream 516952 81326685 ~ 81327113 (-)
G1495538 LOC106566048 other downstream 529750 81311747 ~ 81314315 (-)
G1495222 NA other downstream 728827 81110445 ~ 81115238 (-)
G1495113 NA other downstream 777383 81065971 ~ 81066682 (-)
G1496390 NA other upstream 324934 82172469 ~ 82174852 (-)
G1496689 NA other upstream 387593 82235128 ~ 82245987 (-)
G1496921 NA other upstream 806937 82629246 ~ 82661638 (-)
G1498077 NA other upstream 1757708 83605243 ~ 83605753 (-)
G1498442 NA other upstream 2134806 83982341 ~ 83982894 (-)

Expression


Co-expression Network