G1496010


Basic Information

Item Value
gene id G1496010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81849580 ~ 81849895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710181
cttgaagtcagtaggtcacatgaccaaggagctattgataTTCTAAAGTTTACAAATTGTATGTATAATCGTgagagatgaaaatggacaaactaaagggtgtgcaatatagaagggtagtcagtggacattctgaaccttgtttaagtccagtaggtcacatgaccaaggagctattgaaatgtgaaagtttgaaaaatgtatgtaaaatctCATGAGATGCAAATGGACAAACAAAAGgctgtgcaatgtgtaggcccgCTGAGTGTACATtatgaaccttgtttgaggtgtgtgggtcacatgaccaaggtgC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710181 True 316 lncRNA 0.40 1 81849580 81849895

Neighbor

gene id symbol gene type direction distance location
LOC110494698 LOC106566043 coding upstream 2040 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 coding upstream 247419 81432188 ~ 81602161 (+)
LOC118940108 NA coding upstream 455980 81392702 ~ 81393600 (+)
LOC110494694 LOC106566046 coding upstream 468793 81374533 ~ 81380787 (+)
LOC110494692 LOC106566047 coding upstream 514481 81323567 ~ 81335099 (+)
LOC118940109 NA coding downstream 11656 81861551 ~ 81862479 (+)
LOC110494700 tshb coding downstream 40662 81890557 ~ 81892633 (+)
LOC110494701 LOC106566040 coding downstream 54873 81904768 ~ 81911784 (+)
LOC110495197 NA coding downstream 76756 81926651 ~ 81927921 (+)
LOC118940161 NA coding downstream 174172 82024067 ~ 82026625 (+)
G1496006 NA non-coding upstream 7550 81841749 ~ 81842030 (+)
G1496002 NA non-coding upstream 11292 81838071 ~ 81838288 (+)
G1496001 NA non-coding upstream 12688 81836615 ~ 81836892 (+)
G1495723 NA non-coding upstream 234945 81614344 ~ 81614635 (+)
G1496024 NA non-coding downstream 16549 81866444 ~ 81867444 (+)
G1496026 NA non-coding downstream 19519 81869414 ~ 81873116 (+)
G1496027 NA non-coding downstream 23766 81873661 ~ 81878079 (+)
G1496030 LOC106566041 non-coding downstream 34388 81884283 ~ 81887740 (+)
G1496031 NA non-coding downstream 38144 81888039 ~ 81888262 (+)
G1495362 NA other upstream 511417 81337017 ~ 81338163 (+)
G1495346 NA other upstream 555654 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 2464143 79382417 ~ 79387551 (+)
G1496351 LOC106566032 other downstream 313311 82163138 ~ 82169750 (+)
G1497918 NA other downstream 1764370 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 2030037 83879805 ~ 83890067 (+)
G1498583 NA other downstream 2275942 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2646034 84495929 ~ 84497398 (+)

Expression


Co-expression Network