G1496026


Basic Information

Item Value
gene id G1496026
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81869414 ~ 81873116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710200
gttgtaacgtgataaaatgtggaaaaagtcaagggatctgaaatctttccgaatgcactgaatgttgactatgatgttactttagctgatatggtgacaacaatgtaggctgtgtgtagcggttatgatattggaaaggttttttgcctggtcacatacagctgatgtgttgtgcattgaagtccacaagcgacgGAAAAATGTGAGATGAGGAGAGTGCAaagatgcaagaaggaatacagcgtggctgctatgaaagtgaactgtgtttttgCGTGATtatgggtgtattcattccgcgaTTCTGTTAAacaaaatttttttttaaatggaagcaaacggaacaaagcgtagaataaacatacctgaatttgtccaatagaagctctcatttgcaactgttgtactaatgattacaccctagaacAGCTAGatacaggcaagagtgtgcaaggcaatATTGattgtgtcactgtctgtccatgtgtcactgtcccctCAACATTTTCTCTCGACCAGTGTgaacctacgttgtaaactttcattcataggttaggttgtagcaacctcgtgGTGgcatagggaaaatttgagtatcatgtagtagccaaaccTATCGCTGTTATATTGAActggtgaatggaatatgaatgacagtcatccaatatgctgtaatagaaataaggccatgctctcAAAACAAAATCGTCCTTTctcatctcaaatggcaccgaCCGCCGTTGATTCCCTACCATTTCATTTTCACAGTCAACATTCAGAAAATACATTTAACTCACCTCACACAGCCGGCACCCCTGAGAGTAAAACCAGGAACTTGGTCTATTGCTTTAGCAGTCATTTATTTTCCCATCCCATAGATCAAACTTCTTACTCTGTTCTCCACTCACTAccagggccggctccaggcataaaCAACATAATCAATTGCTTAGGGCCCCAGGTCGCTAGGGGGCCCCTGACCCCAACCCCTCTCCcattttttattatatatttttttctttactcAGTAAggttctcaacttactgttgacagttaaaatagtagaatacacaagctGTAACttcaaaatgtggttgtgcacCAACATTGTTCTGTTATGTCAGTCTCTGACAGTCATCCCCTGACCTCCaaggggcccccattgattttgtgaGTCACTCTCACTCGGATGTCATTAACATGGCAATAGTAATGGCAAATTGtgtgtgtagaattgcaggatatttGCTTTAAAAGTGATTAAAAAATgatctccaccccatggcaaaattggtagaattgcaagaaattagctggaacaacaaaaaaatctctgccccatggcaaaatttgtagaattaaatcaaatgtgttataaaattgcaacattttctctctggcCCATGgcaaaaatgtgtagaactgcagaaaacttgctttaaaactgaaacACTTTCTttcaccccatggcaaaatgtgtagaattgcaggaaattgttCTACGCCATCAAGTGGGGGGCCCCaagcgagatttggttgggggCCTTGCTCCCTACAGAACACAGAGAGCAGTGAAGTGGGCGATCCTCTTCTGTGTTCACTTCCATAATTGTCTGTTGGTTGACAAGGAAACAAATGCTGCACAATTCAGCTGCTTACTCAAACCGTTTCAATGCCGCATGCCTCTTTCCTGTGAACCGGAATTTGTTTCTGGCCCACCGGGTTATCAACTTTGTTGTGTTGTCATCAGACTCTATGGTCAAATAGACACTCTTTTTAGATAAAAGTCTGTCTACATAAATCGGGTTTAAAAGGATTAGCTGTCTTACGCATGTTAGGCCTAACGTTGAGTAATTAGATGCTCTCGTTGGACTTCGGCTGCATACTTTCCGCCATTTTCTTCCAATCTGTCCACTACTGTCAACTACTTTTATACTTTTTGGCGAATGTAGTACAACTTCCGgaaacttttggcatactaaatATATCCATACTATGCTTCAATTTACATCACAAATAGTACAGTTATTGAGGTTagtattcaaacacagctatGGTCATTGGTCAGATTAATTTAACTCTCTGTGTAGGCTTACAGTCAGCAAATCAGAACTTTTTGCAGAGCAGTTAAGTTATTACTTAAAATAACTGGTGAAATAACTGGTGGttgggagaggggggaaaagatGTCTCTTTTTCTCTATGTTTTTTGGATGTTTGCGTATGGTAGGCTGAACCTGCATGTCCAAGTCAGCTGCCAACAAATGCCAGTAATACATTAGTAGcatacagttgttggttaacctAATTAATATTGTCACCTTTGTAAAGATGCATGTGAAGCATGCAAGATACAGTTGCATAACTGTTTCCCTCCAAACCCGTCTAGAAGTAAGTGTGCACTTGCCTTGTCTAGCTCATTGCCTTGTTTATGAAAACTtgacaatataaaaaaaaatcccaaaagaACAATAACAGATAAATCAAGCAAGCAAACAGGTACGCATTTCAGCACAATCTTTATATCCACAAAATTAATATTACATGCTGTAAAATGTCTCATATCAGCCTAAAGTGCTGTAAACACAAAATAAATATGATTACATATGAACTGCATATGCTTATTTCTACTGACAATTAAGTTAGATTTACATTGTTATATATTGTTTTATCTTAACACATGGTTGAAAAGTCCTACCTTACAACATGTGCTGTATACATTCAAATATTGCTTTACATTGCAGTACCCTTCCATGGCCTAGGTCAGGGATGCTCAACTACTATTTGAGAAGGTCTGGTCACACACATTTCCTAGGTGGCTGGATGGATGTGGTAATTTATTGGGATAGTAACAAACCACCTCACAACACATGGGATCCTAAACTATTCACACCACTCTTGTTGGTTTAGAGAACATTTTACagttttaaagctcatttcctgcaattctacacattttgccatgtcttatGTGTGTTCATATGATACTTTAATGACTCTACAAAATCAATGGAGGCCCCCTGGGGGTCGAGGCACCTGGGCAAGTAATCTGGCTATGATAACTATAAGATTTAGATAGCTAGTTAGCCTAACATACATGAGCTAGCTAGTTGATCAACTGTATCAacctacattattacacacttgGGGTTCCTTCTCTTAGTAATGAATTTCATTACAATAAAAGTAGAATGGAAAGGTAAGAGGAAAAATTGTTCTCTTGGAGAACTCCAGTTGACAGAGTGCATTTAgcttggtggcagcatcacattTTAGTGACCTTCTCCACATCCTTCTCCACAATGTTAAACTGAGTGTCTTGGAATCCAGCATTGTTTGATCCCTTCTTCAGCTCTGACCCAGCCTTTTCATTTATCTCAGGTTCTGATGCCTGCAGAAGACACACAAAGACCACACCAGGAGCCAGTTAACACAGGCACAAAACATTTAATACAGCTGTAAGCCTacggtatgagagagag

Function

NR:

description
sodium-coupled monocarboxylate transporter 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710200 True 3483 lncRNA 0.40 2 81869414 81873116

Neighbor

gene id symbol gene type direction distance location
LOC118940109 NA coding upstream 6935 81861551 ~ 81862479 (+)
LOC110494698 LOC106566043 coding upstream 21874 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 coding upstream 267253 81432188 ~ 81602161 (+)
LOC118940108 NA coding upstream 475814 81392702 ~ 81393600 (+)
LOC110494694 LOC106566046 coding upstream 488627 81374533 ~ 81380787 (+)
LOC110494700 tshb coding downstream 17441 81890557 ~ 81892633 (+)
LOC110494701 LOC106566040 coding downstream 31652 81904768 ~ 81911784 (+)
LOC110495197 NA coding downstream 53535 81926651 ~ 81927921 (+)
LOC118940161 NA coding downstream 150951 82024067 ~ 82026625 (+)
LOC110494703 LOC106566038 coding downstream 164457 82037573 ~ 82047285 (+)
G1496024 NA non-coding upstream 1970 81866444 ~ 81867444 (+)
G1496010 NA non-coding upstream 19519 81849580 ~ 81849895 (+)
G1496006 NA non-coding upstream 27384 81841749 ~ 81842030 (+)
G1496002 NA non-coding upstream 31126 81838071 ~ 81838288 (+)
G1496027 NA non-coding downstream 545 81873661 ~ 81878079 (+)
G1496030 LOC106566041 non-coding downstream 11167 81884283 ~ 81887740 (+)
G1496031 NA non-coding downstream 14923 81888039 ~ 81888262 (+)
G1496040 NA non-coding downstream 27068 81900184 ~ 81900390 (+)
G1496042 NA non-coding downstream 28797 81901913 ~ 81902124 (+)
G1495362 NA other upstream 531251 81337017 ~ 81338163 (+)
G1495346 NA other upstream 575488 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 2483977 79382417 ~ 79387551 (+)
G1496351 LOC106566032 other downstream 290090 82163138 ~ 82169750 (+)
G1497918 NA other downstream 1741149 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 2006816 83879805 ~ 83890067 (+)
G1498583 NA other downstream 2252721 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2622813 84495929 ~ 84497398 (+)

Expression


Co-expression Network