G1496040


Basic Information

Item Value
gene id G1496040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81900184 ~ 81900390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710217
ataatgcTCCATGCAACAAGGCTAGGATTGTCCAGGAATGGTTTCACAaacatgacagtgaattcagctttctgcagtggcctgcccagtcatcagatctcaatccaattgagcatctttgggatgagatggaatgaGCTATTTGGATTAGAGATCcactaccagccaacttgacaactgtgggaagcactggagtgaacatgggcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106574953 isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710217 True 207 lncRNA 0.46 1 81900184 81900390

Neighbor

gene id symbol gene type direction distance location
LOC110494700 tshb coding upstream 7551 81890557 ~ 81892633 (+)
LOC118940109 NA coding upstream 37705 81861551 ~ 81862479 (+)
LOC110494698 LOC106566043 coding upstream 52644 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 coding upstream 298023 81432188 ~ 81602161 (+)
LOC118940108 NA coding upstream 506584 81392702 ~ 81393600 (+)
LOC110494701 LOC106566040 coding downstream 4378 81904768 ~ 81911784 (+)
LOC110495197 NA coding downstream 26261 81926651 ~ 81927921 (+)
LOC118940161 NA coding downstream 123677 82024067 ~ 82026625 (+)
LOC110494703 LOC106566038 coding downstream 137183 82037573 ~ 82047285 (+)
LOC110494705 LOC106566037 coding downstream 155909 82041470 ~ 82063859 (+)
G1496031 NA non-coding upstream 11922 81888039 ~ 81888262 (+)
G1496030 LOC106566041 non-coding upstream 12444 81884283 ~ 81887740 (+)
G1496027 NA non-coding upstream 22105 81873661 ~ 81878079 (+)
G1496026 NA non-coding upstream 27068 81869414 ~ 81873116 (+)
G1496024 NA non-coding upstream 32740 81866444 ~ 81867444 (+)
G1496042 NA non-coding downstream 1523 81901913 ~ 81902124 (+)
G1496261 NA non-coding downstream 166350 82066740 ~ 82067138 (+)
G1496262 NA non-coding downstream 174247 82074637 ~ 82075690 (+)
G1496265 NA non-coding downstream 177172 82077562 ~ 82077769 (+)
G1495362 NA other upstream 562021 81337017 ~ 81338163 (+)
G1495346 NA other upstream 606258 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 2514747 79382417 ~ 79387551 (+)
G1496351 LOC106566032 other downstream 262816 82163138 ~ 82169750 (+)
G1497918 NA other downstream 1713875 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1979542 83879805 ~ 83890067 (+)
G1498583 NA other downstream 2225447 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2595539 84495929 ~ 84497398 (+)

Expression


Co-expression Network