G1496262



Basic Information


Item Value
gene id G1496262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82074637 ~ 82075690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1710458
GTGGACTTTCTCTGACACTCGTGTCCCAGTCCACCATCTCATGGTAATTAGGGAGGAGGCTAAGACAGACTCTAGTTGATATTTGCATTCATCCGTTTCCAGGAGGACTCTTTCTCTTTCATGGGAAAAAGAGGAGCAAGATAGAGAGCATTTGTCAGGCTTGTGAATTCTGCCACGTCAATTTAGAGAGAAACTGGTGTTTGCTGCAACCAGCTGGCAATTAATCACAGCTCTACATCTGGGGTGCCGTCATAGTCTATTCATATTCTATCTCGCTTTCCAATTTGTATTCCGTATATGGTGCGTTTCTATGTCCTCTATAGAATGATTACTGTCACCAAAGTATTCTAATATGCCATGACATTTATGAAGGCTACCTGTGACAAAAGATCCAGATTCACATTTTATATGAAACAAAACGTTTTAGTGCTGCACTACTCGAAACACTGTGCATTGGAACTGCAGACATACATCTCTCTGCTGGAGTCATTAGTTACAGTGCAGTGCAGCTCTGCACCATGGCTaaaaggagagggcagagagagacggggaaaggcagggagagacagagataggagaACAGAACcaggagagattgagagacaaTGAGAGTAGGgcagggagagacagagaaaggagagcaaggagagacaggtgggaggggaGCAGATTGAGGTGTGGTGAAACAGCCTGTGCTCACTGGCATCTCTCCCCAGGATAGGAGATCACACGACTGGGGCAGGTGGTCACACTCATGCTTTGCCCTAGTGTCAGGGATAACCGTGTGTGTATGCTTATGCAGTGTGTGTCTACCAGtgtgtgcatgtactgtatgtgtgtgcagtGTCTGTGTATGCCAGtatctaggtttccatccaattggtgacagattttcatgtgaatattctagaaTCTGCATGAAGAAAATATGCAAGTGGTGTGTTTTCTACCAAACGGACATGTTGTGGATAGAAATCAGTGCTTGATGGAGCAgtgcaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1710458 True 1000 lncRNA 0.46 2 82074637 82075690

Neighbor


gene id symbol gene type direction distance location
LOC110494705 LOC106566037 coding upstream 10778 82041470 ~ 82063859 (+)
LOC110494703 LOC106566038 coding upstream 27352 82037573 ~ 82047285 (+)
LOC118940161 NA coding upstream 48012 82024067 ~ 82026625 (+)
LOC110495197 NA coding upstream 146716 81926651 ~ 81927921 (+)
LOC110494701 LOC106566040 coding upstream 162853 81904768 ~ 81911784 (+)
LOC110494706 LOC106566035 coding downstream 26334 82102024 ~ 82105799 (+)
LOC110494708 LOC106566034 coding downstream 76481 82152171 ~ 82155889 (+)
LOC110493273 LOC106566076 coding downstream 143251 82218941 ~ 82220659 (+)
LOC110494711 LOC106566069 coding downstream 151088 82226778 ~ 82233962 (+)
LOC110494713 LOC106566029 coding downstream 188370 82264060 ~ 82275994 (+)
G1496261 NA non-coding upstream 7499 82066740 ~ 82067138 (+)
G1496042 NA non-coding upstream 172513 81901913 ~ 81902124 (+)
G1496040 NA non-coding upstream 174247 81900184 ~ 81900390 (+)
G1496031 NA non-coding upstream 186375 81888039 ~ 81888262 (+)
G1496265 NA non-coding downstream 1872 82077562 ~ 82077769 (+)
G1496267 NA non-coding downstream 4706 82080396 ~ 82080595 (+)
G1496277 NA non-coding downstream 30482 82106172 ~ 82106654 (+)
G1496276 NA non-coding downstream 31067 82106757 ~ 82107380 (+)
LOC110494698 LOC106566043 other upstream 241536 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 472480 81432188 ~ 81602161 (+)
G1495362 NA other upstream 736474 81337017 ~ 81338163 (+)
G1495346 NA other upstream 780711 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 2689200 79382417 ~ 79387551 (+)
G1496351 LOC106566032 other downstream 87516 82163138 ~ 82169750 (+)
G1497918 NA other downstream 1538575 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1804242 83879805 ~ 83890067 (+)
G1498583 NA other downstream 2050147 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2420239 84495929 ~ 84497398 (+)

Expression



Co-expression Network