Gene
RNA
| Item | Value |
|---|---|
| gene id | G1496279 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 82108045 ~ 82108245 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1710478 | True | 201 | lncRNA | 0.46 | 1 | 82108045 | 82108245 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494706 | LOC106566035 | coding | upstream | 2246 | 82102024 ~ 82105799 (+) |
| LOC110494705 | LOC106566037 | coding | upstream | 44186 | 82041470 ~ 82063859 (+) |
| LOC110494703 | LOC106566038 | coding | upstream | 60760 | 82037573 ~ 82047285 (+) |
| LOC118940161 | NA | coding | upstream | 81420 | 82024067 ~ 82026625 (+) |
| LOC110495197 | NA | coding | upstream | 180124 | 81926651 ~ 81927921 (+) |
| LOC110494708 | LOC106566034 | coding | downstream | 43926 | 82152171 ~ 82155889 (+) |
| LOC110493273 | LOC106566076 | coding | downstream | 110696 | 82218941 ~ 82220659 (+) |
| LOC110494711 | LOC106566069 | coding | downstream | 118533 | 82226778 ~ 82233962 (+) |
| LOC110494713 | LOC106566029 | coding | downstream | 155815 | 82264060 ~ 82275994 (+) |
| LOC110494715 | tead3 | coding | downstream | 169105 | 82277350 ~ 82353407 (+) |
| G1496276 | NA | non-coding | upstream | 665 | 82106757 ~ 82107380 (+) |
| G1496277 | NA | non-coding | upstream | 1391 | 82106172 ~ 82106654 (+) |
| G1496267 | NA | non-coding | upstream | 27450 | 82080396 ~ 82080595 (+) |
| G1496265 | NA | non-coding | upstream | 30276 | 82077562 ~ 82077769 (+) |
| G1496280 | NA | non-coding | downstream | 5299 | 82113544 ~ 82113808 (+) |
| G1496330 | NA | non-coding | downstream | 16702 | 82124947 ~ 82125497 (+) |
| G1496333 | NA | non-coding | downstream | 18424 | 82126669 ~ 82127005 (+) |
| G1496347 | NA | non-coding | downstream | 28233 | 82136478 ~ 82211639 (+) |
| G1496351 | LOC106566032 | non-coding | downstream | 54893 | 82163138 ~ 82169750 (+) |
| LOC110494698 | LOC106566043 | other | upstream | 274944 | 81828571 ~ 81847540 (+) |
| LOC110494696 | LOC106582736 | other | upstream | 505888 | 81432188 ~ 81602161 (+) |
| G1495362 | NA | other | upstream | 769882 | 81337017 ~ 81338163 (+) |
| G1495346 | NA | other | upstream | 814119 | 81293440 ~ 81293926 (+) |
| tusc2 | tusc2 | other | upstream | 2722608 | 79382417 ~ 79387551 (+) |
| G1497918 | NA | other | downstream | 1506020 | 83614265 ~ 83634495 (+) |
| LOC110494749 | LOC106566083 | other | downstream | 1771687 | 83879805 ~ 83890067 (+) |
| G1498583 | NA | other | downstream | 2017592 | 84125837 ~ 84174177 (+) |
| G1498913 | NA | other | downstream | 2387684 | 84495929 ~ 84497398 (+) |
