G1496333


Basic Information

Item Value
gene id G1496333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82126669 ~ 82127005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710551
taactagacaagtcagttaagaacacattcttaatttcaatgacggcctaggaacggtgggtcaactgccttgttcaggggcagaatgacagatttttaccttgtcagctcagggattcaatcttacaaccttacagttaactagtccaacgctctgaccacctgccttacattgcactccacgaggagcctgcctgttacgcaaatgcagtaagaagccaaggtaagttgctagctagcattaaacttatcttataaaaaacaatcaatcaatcataatcactagttaactacacatggttgatgatattactagtttatctagcgtgtcctgcgt

Function

NR:

description
PREDICTED: oligosaccharyltransferase complex subunit ostc isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710551 True 337 lncRNA 0.41 1 82126669 82127005

Neighbor

gene id symbol gene type direction distance location
LOC110494706 LOC106566035 coding upstream 20870 82102024 ~ 82105799 (+)
LOC110494705 LOC106566037 coding upstream 62810 82041470 ~ 82063859 (+)
LOC110494703 LOC106566038 coding upstream 79384 82037573 ~ 82047285 (+)
LOC118940161 NA coding upstream 100044 82024067 ~ 82026625 (+)
LOC110495197 NA coding upstream 198748 81926651 ~ 81927921 (+)
LOC110494708 LOC106566034 coding downstream 25166 82152171 ~ 82155889 (+)
LOC110493273 LOC106566076 coding downstream 91936 82218941 ~ 82220659 (+)
LOC110494711 LOC106566069 coding downstream 99773 82226778 ~ 82233962 (+)
LOC110494713 LOC106566029 coding downstream 137055 82264060 ~ 82275994 (+)
LOC110494715 tead3 coding downstream 150345 82277350 ~ 82353407 (+)
G1496330 NA non-coding upstream 1172 82124947 ~ 82125497 (+)
G1496280 NA non-coding upstream 12861 82113544 ~ 82113808 (+)
G1496279 NA non-coding upstream 18424 82108045 ~ 82108245 (+)
G1496276 NA non-coding upstream 19289 82106757 ~ 82107380 (+)
G1496277 NA non-coding upstream 20015 82106172 ~ 82106654 (+)
G1496347 NA non-coding downstream 9473 82136478 ~ 82211639 (+)
G1496351 LOC106566032 non-coding downstream 36133 82163138 ~ 82169750 (+)
G1496443 NA non-coding downstream 97660 82224665 ~ 82224904 (+)
G1496464 NA non-coding downstream 119380 82246385 ~ 82246616 (+)
G1496466 NA non-coding downstream 121197 82248202 ~ 82248401 (+)
LOC110494698 LOC106566043 other upstream 293568 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 524512 81432188 ~ 81602161 (+)
G1495362 NA other upstream 788506 81337017 ~ 81338163 (+)
G1495346 NA other upstream 832743 81293440 ~ 81293926 (+)
tusc2 tusc2 other upstream 2741232 79382417 ~ 79387551 (+)
G1497918 NA other downstream 1487260 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1752927 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1998832 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2368924 84495929 ~ 84497398 (+)

Expression


Co-expression Network