G1496471


Basic Information

Item Value
gene id G1496471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82259452 ~ 82259693 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710718
cccatttgcgaccaagctttaacttgttggggataggaggcagtattttcactttggatgaattgcgtgcccatagtgaactgcatcctactctgtcctagattgctaatatatgcatattagacCTGGCACGTCTAGCAGAGGGAGCCATCGCCTCATGATGTATACTCCGTCTGTCACCAGAcctcgacgagtctccccctggtggctgacctgctgtgcgccacccccccccccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710718 True 242 lncRNA 0.54 1 82259452 82259693

Neighbor

gene id symbol gene type direction distance location
LOC110494711 LOC106566069 coding upstream 25490 82226778 ~ 82233962 (+)
LOC110493273 LOC106566076 coding upstream 38793 82218941 ~ 82220659 (+)
LOC110494708 LOC106566034 coding upstream 103563 82152171 ~ 82155889 (+)
LOC110494706 LOC106566035 coding upstream 153653 82102024 ~ 82105799 (+)
LOC110494705 LOC106566037 coding upstream 195593 82041470 ~ 82063859 (+)
LOC110494713 LOC106566029 coding downstream 4367 82264060 ~ 82275994 (+)
LOC110494715 tead3 coding downstream 17657 82277350 ~ 82353407 (+)
LOC110494716 LOC106566027 coding downstream 131750 82391443 ~ 82403512 (+)
LOC118940498 LOC106566024 coding downstream 201994 82461687 ~ 82518805 (+)
LOC110493275 LOC106566024 coding downstream 273828 82533521 ~ 82636002 (+)
G1496466 NA non-coding upstream 11051 82248202 ~ 82248401 (+)
G1496464 NA non-coding upstream 12836 82246385 ~ 82246616 (+)
G1496443 NA non-coding upstream 34548 82224665 ~ 82224904 (+)
G1496347 NA non-coding upstream 47813 82136478 ~ 82211639 (+)
G1496351 LOC106566032 non-coding upstream 89702 82163138 ~ 82169750 (+)
G1496455 NA non-coding downstream 16741 82276434 ~ 82276887 (+)
G1496453 NA non-coding downstream 82908 82342601 ~ 82343215 (+)
G1496529 NA non-coding downstream 156557 82416250 ~ 82416503 (+)
G1496535 NA non-coding downstream 166502 82426195 ~ 82426410 (+)
G1496537 NA non-coding downstream 167978 82427671 ~ 82427927 (+)
LOC110494698 LOC106566043 other upstream 426351 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 657295 81432188 ~ 81602161 (+)
G1495362 NA other upstream 921289 81337017 ~ 81338163 (+)
G1495346 NA other upstream 965526 81293440 ~ 81293926 (+)
G1497918 NA other downstream 1354572 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1620239 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1866144 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2236236 84495929 ~ 84497398 (+)
G1498912 NA other downstream 2256424 84516117 ~ 84567678 (+)

Expression


Co-expression Network