Gene
RNA
| Item | Value |
|---|---|
| gene id | G1496537 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 82427671 ~ 82427927 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1710789 | True | 257 | lncRNA | 0.40 | 1 | 82427671 | 82427927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494716 | LOC106566027 | coding | upstream | 24159 | 82391443 ~ 82403512 (+) |
| LOC110494715 | tead3 | coding | upstream | 74264 | 82277350 ~ 82353407 (+) |
| LOC110494713 | LOC106566029 | coding | upstream | 151677 | 82264060 ~ 82275994 (+) |
| LOC110494711 | LOC106566069 | coding | upstream | 193709 | 82226778 ~ 82233962 (+) |
| LOC110493273 | LOC106566076 | coding | upstream | 207012 | 82218941 ~ 82220659 (+) |
| LOC118940498 | LOC106566024 | coding | downstream | 33760 | 82461687 ~ 82518805 (+) |
| LOC110493275 | LOC106566024 | coding | downstream | 105594 | 82533521 ~ 82636002 (+) |
| LOC110494718 | LOC106566023 | coding | downstream | 208458 | 82636385 ~ 82661644 (+) |
| LOC110494719 | LOC106566022 | coding | downstream | 240895 | 82668822 ~ 82717448 (+) |
| nudt3 | LOC106566013 | coding | downstream | 818803 | 83246730 ~ 83264337 (+) |
| G1496535 | NA | non-coding | upstream | 1261 | 82426195 ~ 82426410 (+) |
| G1496529 | NA | non-coding | upstream | 11168 | 82416250 ~ 82416503 (+) |
| G1496453 | NA | non-coding | upstream | 84456 | 82342601 ~ 82343215 (+) |
| G1496455 | NA | non-coding | upstream | 150784 | 82276434 ~ 82276887 (+) |
| G1496471 | NA | non-coding | upstream | 167978 | 82259452 ~ 82259693 (+) |
| G1496548 | NA | non-coding | downstream | 20223 | 82448150 ~ 82448503 (+) |
| G1496552 | NA | non-coding | downstream | 30340 | 82458267 ~ 82459046 (+) |
| G1496553 | NA | non-coding | downstream | 31648 | 82459575 ~ 82459915 (+) |
| G1496563 | NA | non-coding | downstream | 42171 | 82470098 ~ 82470306 (+) |
| G1496567 | NA | non-coding | downstream | 48950 | 82476877 ~ 82477098 (+) |
| G1496351 | LOC106566032 | other | upstream | 257921 | 82163138 ~ 82169750 (+) |
| LOC110494698 | LOC106566043 | other | upstream | 594570 | 81828571 ~ 81847540 (+) |
| LOC110494696 | LOC106582736 | other | upstream | 825514 | 81432188 ~ 81602161 (+) |
| G1495362 | NA | other | upstream | 1089508 | 81337017 ~ 81338163 (+) |
| G1495346 | NA | other | upstream | 1133745 | 81293440 ~ 81293926 (+) |
| G1497918 | NA | other | downstream | 1186338 | 83614265 ~ 83634495 (+) |
| LOC110494749 | LOC106566083 | other | downstream | 1452005 | 83879805 ~ 83890067 (+) |
| G1498583 | NA | other | downstream | 1697910 | 84125837 ~ 84174177 (+) |
| G1498913 | NA | other | downstream | 2068002 | 84495929 ~ 84497398 (+) |
| G1498912 | NA | other | downstream | 2088190 | 84516117 ~ 84567678 (+) |
