G1496553


Basic Information

Item Value
gene id G1496553
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82459575 ~ 82459915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710806
CATACCCACCggcgctggaccagacaggactggcaaaaagtgctcttcactgacaagtcgcggttttgtctcaccaggggtgatggctggattcgcatttatcgttgaaggaatgagcgttacaccgaggcatgtactctggagcgggatcgatttggaggtggagggtccgtcatggtctggggcggtgtgtcacagcatcatcggactgggCTTGTTGTcaatgcaggcaatctcaacgctgtgcgttacaggaaagacatcctcctacctcatgtggtacccttcctgcagcctcatcctgacatgaccctacagcatgacaatgtcactaGCCAttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710806 True 341 lncRNA 0.54 1 82459575 82459915

Neighbor

gene id symbol gene type direction distance location
LOC110494716 LOC106566027 coding upstream 56063 82391443 ~ 82403512 (+)
LOC110494715 tead3 coding upstream 106168 82277350 ~ 82353407 (+)
LOC110494713 LOC106566029 coding upstream 183581 82264060 ~ 82275994 (+)
LOC110494711 LOC106566069 coding upstream 225613 82226778 ~ 82233962 (+)
LOC110493273 LOC106566076 coding upstream 238916 82218941 ~ 82220659 (+)
LOC118940498 LOC106566024 coding downstream 1772 82461687 ~ 82518805 (+)
LOC110493275 LOC106566024 coding downstream 73606 82533521 ~ 82636002 (+)
LOC110494718 LOC106566023 coding downstream 176470 82636385 ~ 82661644 (+)
LOC110494719 LOC106566022 coding downstream 208907 82668822 ~ 82717448 (+)
nudt3 LOC106566013 coding downstream 786815 83246730 ~ 83264337 (+)
G1496552 NA non-coding upstream 529 82458267 ~ 82459046 (+)
G1496548 NA non-coding upstream 11072 82448150 ~ 82448503 (+)
G1496537 NA non-coding upstream 31648 82427671 ~ 82427927 (+)
G1496535 NA non-coding upstream 33165 82426195 ~ 82426410 (+)
G1496529 NA non-coding upstream 43072 82416250 ~ 82416503 (+)
G1496563 NA non-coding downstream 10183 82470098 ~ 82470306 (+)
G1496567 NA non-coding downstream 16962 82476877 ~ 82477098 (+)
G1496568 NA non-coding downstream 17983 82477898 ~ 82478209 (+)
G1496569 NA non-coding downstream 18473 82478388 ~ 82478710 (+)
G1496570 NA non-coding downstream 18799 82478714 ~ 82479061 (+)
G1496351 LOC106566032 other upstream 289825 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 626474 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 857418 81432188 ~ 81602161 (+)
G1495362 NA other upstream 1121412 81337017 ~ 81338163 (+)
G1495346 NA other upstream 1165649 81293440 ~ 81293926 (+)
G1497918 NA other downstream 1154350 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1420017 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1665922 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2036014 84495929 ~ 84497398 (+)
G1498912 NA other downstream 2056202 84516117 ~ 84567678 (+)

Expression


Co-expression Network