G1496577


Basic Information

Item Value
gene id G1496577
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82496272 ~ 82496593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1710831
gtggtatcctatgtttcacgtaatcgtggctgaatgatgacatagatattcagctagcgggatacacgctgcaccggcaaggTAGAACAGCACattctggtaagacgagggggggcaGTCTGTGCACATTTGTAAACAaaagctggtgcacgaaatctaaggaagtctctagattttgctcgcctgaagtacagtatattgtgataaattgcaggtcacactacttgcctagagagttttcagctatacttttcgtggctgtttatttaccaccacagacagatgatggcactaagaccacactcagtcagctatataagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1710831 True 322 lncRNA 0.44 1 82496272 82496593

Neighbor

gene id symbol gene type direction distance location
LOC110494716 LOC106566027 coding upstream 92760 82391443 ~ 82403512 (+)
LOC110494715 tead3 coding upstream 142865 82277350 ~ 82353407 (+)
LOC110494713 LOC106566029 coding upstream 220278 82264060 ~ 82275994 (+)
LOC110494711 LOC106566069 coding upstream 262310 82226778 ~ 82233962 (+)
LOC110493273 LOC106566076 coding upstream 275613 82218941 ~ 82220659 (+)
LOC110493275 LOC106566024 coding downstream 36928 82533521 ~ 82636002 (+)
LOC110494718 LOC106566023 coding downstream 139792 82636385 ~ 82661644 (+)
LOC110494719 LOC106566022 coding downstream 172229 82668822 ~ 82717448 (+)
nudt3 LOC106566013 coding downstream 750137 83246730 ~ 83264337 (+)
LOC110494727 LOC106566012 coding downstream 773054 83269647 ~ 83311364 (+)
G1496576 NA non-coding upstream 1734 82494327 ~ 82494538 (+)
G1496570 NA non-coding upstream 17211 82478714 ~ 82479061 (+)
G1496569 NA non-coding upstream 17562 82478388 ~ 82478710 (+)
G1496568 NA non-coding upstream 18063 82477898 ~ 82478209 (+)
G1496567 NA non-coding upstream 19174 82476877 ~ 82477098 (+)
G1496579 NA non-coding downstream 1584 82498177 ~ 82498459 (+)
G1496581 NA non-coding downstream 4369 82500962 ~ 82501173 (+)
G1496583 LOC106582599 non-coding downstream 8292 82504885 ~ 82505142 (+)
G1496585 NA non-coding downstream 10549 82507142 ~ 82507348 (+)
G1496586 NA non-coding downstream 11776 82508369 ~ 82509537 (+)
G1496351 LOC106566032 other upstream 326522 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 663171 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 894115 81432188 ~ 81602161 (+)
G1495362 NA other upstream 1158109 81337017 ~ 81338163 (+)
G1495346 NA other upstream 1202346 81293440 ~ 81293926 (+)
G1497918 NA other downstream 1117672 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1383339 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1629244 84125837 ~ 84174177 (+)
G1498913 NA other downstream 1999336 84495929 ~ 84497398 (+)
G1498912 NA other downstream 2019524 84516117 ~ 84567678 (+)

Expression


Co-expression Network