Gene
RNA
| Item | Value |
|---|---|
| gene id | G1496581 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 82500962 ~ 82501173 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1710835 | True | 212 | lncRNA | 0.44 | 1 | 82500962 | 82501173 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494716 | LOC106566027 | coding | upstream | 97450 | 82391443 ~ 82403512 (+) |
| LOC110494715 | tead3 | coding | upstream | 147555 | 82277350 ~ 82353407 (+) |
| LOC110494713 | LOC106566029 | coding | upstream | 224968 | 82264060 ~ 82275994 (+) |
| LOC110494711 | LOC106566069 | coding | upstream | 267000 | 82226778 ~ 82233962 (+) |
| LOC110493273 | LOC106566076 | coding | upstream | 280303 | 82218941 ~ 82220659 (+) |
| LOC110493275 | LOC106566024 | coding | downstream | 32348 | 82533521 ~ 82636002 (+) |
| LOC110494718 | LOC106566023 | coding | downstream | 135212 | 82636385 ~ 82661644 (+) |
| LOC110494719 | LOC106566022 | coding | downstream | 167649 | 82668822 ~ 82717448 (+) |
| nudt3 | LOC106566013 | coding | downstream | 745557 | 83246730 ~ 83264337 (+) |
| LOC110494727 | LOC106566012 | coding | downstream | 768474 | 83269647 ~ 83311364 (+) |
| G1496579 | NA | non-coding | upstream | 2503 | 82498177 ~ 82498459 (+) |
| G1496577 | NA | non-coding | upstream | 4369 | 82496272 ~ 82496593 (+) |
| G1496576 | NA | non-coding | upstream | 6424 | 82494327 ~ 82494538 (+) |
| G1496570 | NA | non-coding | upstream | 21901 | 82478714 ~ 82479061 (+) |
| G1496569 | NA | non-coding | upstream | 22252 | 82478388 ~ 82478710 (+) |
| G1496583 | LOC106582599 | non-coding | downstream | 3712 | 82504885 ~ 82505142 (+) |
| G1496585 | NA | non-coding | downstream | 5969 | 82507142 ~ 82507348 (+) |
| G1496586 | NA | non-coding | downstream | 7196 | 82508369 ~ 82509537 (+) |
| G1496591 | NA | non-coding | downstream | 18674 | 82519847 ~ 82520105 (+) |
| G1496592 | NA | non-coding | downstream | 19709 | 82520882 ~ 82521172 (+) |
| G1496351 | LOC106566032 | other | upstream | 331212 | 82163138 ~ 82169750 (+) |
| LOC110494698 | LOC106566043 | other | upstream | 667861 | 81828571 ~ 81847540 (+) |
| LOC110494696 | LOC106582736 | other | upstream | 898805 | 81432188 ~ 81602161 (+) |
| G1495362 | NA | other | upstream | 1162799 | 81337017 ~ 81338163 (+) |
| G1495346 | NA | other | upstream | 1207036 | 81293440 ~ 81293926 (+) |
| G1497918 | NA | other | downstream | 1113092 | 83614265 ~ 83634495 (+) |
| LOC110494749 | LOC106566083 | other | downstream | 1378759 | 83879805 ~ 83890067 (+) |
| G1498583 | NA | other | downstream | 1624664 | 84125837 ~ 84174177 (+) |
| G1498913 | NA | other | downstream | 1994756 | 84495929 ~ 84497398 (+) |
| G1498912 | NA | other | downstream | 2014944 | 84516117 ~ 84567678 (+) |
