G1496971


Basic Information

Item Value
gene id G1496971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82722897 ~ 82723414 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1711270
gctcagtttggcctgacggccagctctaggaacagtcttggtggttccaaattcttccatttaagaatgatggaggccactgtgttcttgtggaccttcaatgctgcagaaatgttttgttacccttccccagatctgtgcctcaacacacaacatcttctgcacatctaccattccagtgtttaattgctatattgtaattactttgccaccatggcctatttattgccttaactcccttatcttacctcatttgcactcactgtatatggactttttgttttcttttgttctactgtattactgactgtatgttctgtttattccatgtgtaactctgtgttgttgtatgtgttgaattgctatgctttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1711270 True 422 lncRNA 0.41 2 82722897 82723414

Neighbor

gene id symbol gene type direction distance location
LOC110494719 LOC106566022 coding upstream 5449 82668822 ~ 82717448 (+)
LOC110494718 LOC106566023 coding upstream 61253 82636385 ~ 82661644 (+)
LOC110493275 LOC106566024 coding upstream 86895 82533521 ~ 82636002 (+)
LOC118940498 LOC106566024 coding upstream 204092 82461687 ~ 82518805 (+)
LOC110494716 LOC106566027 coding upstream 319385 82391443 ~ 82403512 (+)
nudt3 LOC106566013 coding downstream 523316 83246730 ~ 83264337 (+)
LOC110494727 LOC106566012 coding downstream 546233 83269647 ~ 83311364 (+)
trnae-uuc-8 NA coding downstream 714671 83438085 ~ 83438156 (+)
trnae-uuc-9 NA coding downstream 716011 83439425 ~ 83439496 (+)
trnar-acg-8 NA coding downstream 717067 83440481 ~ 83440553 (+)
G1496601 NA non-coding upstream 193936 82528537 ~ 82528961 (+)
G1496600 NA non-coding upstream 195184 82527464 ~ 82527713 (+)
G1496592 NA non-coding upstream 201725 82520882 ~ 82521172 (+)
G1496591 NA non-coding upstream 202792 82519847 ~ 82520105 (+)
G1496586 NA non-coding upstream 213360 82508369 ~ 82509537 (+)
G1496996 NA non-coding downstream 41437 82764851 ~ 82765426 (+)
G1497095 NA non-coding downstream 71354 82794768 ~ 82795006 (+)
G1497096 NA non-coding downstream 71651 82795065 ~ 82795328 (+)
G1497106 NA non-coding downstream 80266 82803680 ~ 82804410 (+)
G1497171 LOC106566017 non-coding downstream 138690 82862104 ~ 82862674 (+)
G1496351 LOC106566032 other upstream 553147 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 889796 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 1120740 81432188 ~ 81602161 (+)
G1495362 NA other upstream 1384734 81337017 ~ 81338163 (+)
G1495346 NA other upstream 1428971 81293440 ~ 81293926 (+)
G1497918 NA other downstream 890851 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1156518 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1402423 84125837 ~ 84174177 (+)
G1498913 NA other downstream 1772515 84495929 ~ 84497398 (+)
G1498912 NA other downstream 1792703 84516117 ~ 84567678 (+)

Expression


Co-expression Network