G1497173 (LOC106566017)


Basic Information

Item Value
gene id G1497173
gene name LOC106566017
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82863980 ~ 82864266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1711514
AGCACAATCAACCTGGATATGCCCTCAATGGTTCCACATTCATTTTTGATCTTGATCTTGATTTCTCCTGTGGCTTTCCGCTGGCACTTGCTGAGGAGGAGGCGACTGTGTGTGAGCGACTTCTCAATATTGATGTGTTTGTCCTCCACCAACTCCTCACCTTCGTTGTACCAATAGATCTTCATTGGGTCACGACCCATAAAAGACAGCTTGAAGGTAGCGCTCTGGCCAACCTTTATTATGACGGGCTTTGAGAAATCAGCCAGGTCATCTGGGTTTACTCTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1711514 True 287 lncRNA 0.47 1 82863980 82864266

Neighbor

gene id symbol gene type direction distance location
LOC110494719 LOC106566022 coding upstream 146532 82668822 ~ 82717448 (+)
LOC110494718 LOC106566023 coding upstream 202336 82636385 ~ 82661644 (+)
LOC110493275 LOC106566024 coding upstream 227978 82533521 ~ 82636002 (+)
LOC118940498 LOC106566024 coding upstream 345175 82461687 ~ 82518805 (+)
LOC110494716 LOC106566027 coding upstream 460468 82391443 ~ 82403512 (+)
nudt3 LOC106566013 coding downstream 382464 83246730 ~ 83264337 (+)
LOC110494727 LOC106566012 coding downstream 405381 83269647 ~ 83311364 (+)
trnae-uuc-8 NA coding downstream 573819 83438085 ~ 83438156 (+)
trnae-uuc-9 NA coding downstream 575159 83439425 ~ 83439496 (+)
trnar-acg-8 NA coding downstream 576215 83440481 ~ 83440553 (+)
G1497171 LOC106566017 non-coding upstream 1306 82862104 ~ 82862674 (+)
G1497106 NA non-coding upstream 59570 82803680 ~ 82804410 (+)
G1497096 NA non-coding upstream 68652 82795065 ~ 82795328 (+)
G1497095 NA non-coding upstream 68974 82794768 ~ 82795006 (+)
G1496996 NA non-coding upstream 98554 82764851 ~ 82765426 (+)
G1497175 LOC106566017 non-coding downstream 1972 82866238 ~ 82866512 (+)
G1497176 LOC106566017 non-coding downstream 3209 82867475 ~ 82867700 (+)
G1497166 NA non-coding downstream 10304 82874570 ~ 82933448 (+)
G1497181 NA non-coding downstream 16442 82880708 ~ 82888051 (+)
G1497258 LOC106566015 non-coding downstream 126078 82990344 ~ 82991298 (+)
G1496351 LOC106566032 other upstream 694230 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 1030879 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 1261823 81432188 ~ 81602161 (+)
G1495362 NA other upstream 1525817 81337017 ~ 81338163 (+)
G1495346 NA other upstream 1570054 81293440 ~ 81293926 (+)
G1497918 NA other downstream 749999 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1015666 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1261571 84125837 ~ 84174177 (+)
G1498913 NA other downstream 1631663 84495929 ~ 84497398 (+)
G1498912 NA other downstream 1651851 84516117 ~ 84567678 (+)

Expression


Co-expression Network