G1497916


Basic Information

Item Value
gene id G1497916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83511112 ~ 83518955 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1712327
tgtgtacactggtctagctgtgacctgacttcagcttagacgtggggccagtggcgcaatggataacgtgtctgactacggatcagaagattctaggttcgactcctggctggctcaatatttaattgattgaattcaagccgggattgatactgaatacttttcagtgcttctggctgttctcacttcaaactcattttagactgatttcatctggacattccccaacatctcagagaaaaaaaagatgtagcttttaatccaacaggcataatgtcaacatttaaagatttgtctgtgatgtgtattttaagtatgtgtcttcccatatggtctaccggttaggattcctggttttcacccaggtgtcccgggttcaactcccggtatgggaaagaatatcttgtcgtttgggatgcacttgtgtaacaacagatactgcattttaactggcagcagtttcacacaacacaacaatattccctcagcaacaggaaatgtgacatgttatgtagattcaaattatacaaggcattttaaacgttgaatagacttcatggctgcatttcttgctccgCAGTAatattcatgcaacaacaggaggatcaaattaagatttgcatctgtaacagaaatcccaaggaaccttgtcggtgacagaagctatgactgtgtacactggcctaggtgtgtcctgacttcagcttggctgtgcggccagtggcgcaatggataacgtgtctgataacaggtcagaagattgaatatttgactcctgtttggctcaaaactagatttatttgaccaaaatcaagctgggaaaaatactgtatacttttcattgtgtctggcagtcctcgattcaaacacattttagactgattttatatgggacttttctccaacatctctgagaaaaagatggagcttgtaatcacaacaagcataatttcaacgtttatggatttgtctgtgatgttttttttaagtaactgtcttcccatatggtctggctttaaggattcctggttttcgcccgggttgaactcccagtatgggaaagaacatcttgtcatttgggatgcacttgtgtaagaacagataccacattttaactggcagcagaatcacacaacacaacaatattccctcagcaacagcaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1712327 True 1166 lncRNA 0.41 3 83511112 83518955

Neighbor

gene id symbol gene type direction distance location
trnae-uuc-46 NA coding upstream 941 83510100 ~ 83510171 (+)
trnar-acg-45 NA coding upstream 2558 83508482 ~ 83508554 (+)
trnae-uuc-45 NA coding upstream 3615 83507426 ~ 83507497 (+)
trnar-acg-44 NA coding upstream 3897 83507143 ~ 83507215 (+)
trnae-uuc-44 NA coding upstream 4954 83506087 ~ 83506158 (+)
trnar-acg-51 NA coding downstream 214 83519169 ~ 83519241 (+)
trnae-uuc-53 NA coding downstream 497 83519452 ~ 83519523 (+)
trnar-acg-52 NA coding downstream 1552 83520507 ~ 83520579 (+)
trnae-uuc-54 NA coding downstream 1830 83520785 ~ 83520856 (+)
trnar-acg-53 NA coding downstream 2886 83521841 ~ 83521913 (+)
G1497938 NA non-coding upstream 40344 83459338 ~ 83470768 (+)
G1497934 NA non-coding upstream 50270 83452852 ~ 83460842 (+)
G1497906 NA non-coding upstream 78990 83431862 ~ 83432122 (+)
G1497539 NA non-coding upstream 92857 83417937 ~ 83418255 (+)
G1497536 NA non-coding upstream 101150 83409697 ~ 83409962 (+)
G1497947 NA non-coding downstream 9647 83528602 ~ 83528822 (+)
LOC110494735 asb14 non-coding downstream 43592 83562178 ~ 83575184 (+)
G1497974 NA non-coding downstream 86703 83605658 ~ 83605866 (+)
G1497977 NA non-coding downstream 88769 83607724 ~ 83608208 (+)
G1497978 NA non-coding downstream 99901 83618856 ~ 83622608 (+)
G1496351 LOC106566032 other upstream 1341362 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 1678011 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 1908955 81432188 ~ 81602161 (+)
G1495362 NA other upstream 2172949 81337017 ~ 81338163 (+)
G1495346 NA other upstream 2217186 81293440 ~ 81293926 (+)
G1497918 NA other downstream 95310 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 360977 83879805 ~ 83890067 (+)
G1498583 NA other downstream 606882 84125837 ~ 84174177 (+)
G1498913 NA other downstream 976974 84495929 ~ 84497398 (+)
G1498912 NA other downstream 997162 84516117 ~ 84567678 (+)

Expression


Co-expression Network