G1497977


Basic Information

Item Value
gene id G1497977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83607724 ~ 83608208 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1712395
atggtgttggaagggactgagcacgcacccctgaggggctcccgtgttgaggagcagtgtggcggatgtgttgttacctaaccttaccacctgggggcggcccgtcaggaagtacaagatccagttgcagagggaggtgtttagtcccagtgtccttagcttagtgatgagctttgaggacactatggtgttgaacgctgagctgtagtaaaggactagcattttcacataggtgttccttttgtccaggtgtgaaagggcagtgtggagtgcaatagagattgcatcatctgtgaatctgttggtgcggtatgcaaattggagtgggtctagggtttctgggataatggtgtttgagccatgaccagcctttcaaagcatttaaaaaaaaaactttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgcctgtgtaggggcagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1712395 True 485 lncRNA 0.47 1 83607724 83608208

Neighbor

gene id symbol gene type direction distance location
hesx1 LOC106582615 coding upstream 12183 83592762 ~ 83595541 (+)
LOC110494736 appl1 coding upstream 15105 83576027 ~ 83592619 (+)
LOC110494735 asb14 coding upstream 32540 83562178 ~ 83575184 (+)
LOC110494734 LOC106566095 coding upstream 45570 83560011 ~ 83562154 (+)
trnae-uuc-57 NA coding upstream 83523 83524130 ~ 83524201 (+)
LOC110494740 LOC106566091 coding downstream 20980 83629188 ~ 83630857 (+)
LOC110494741 il17rd coding downstream 34237 83642445 ~ 83701923 (+)
LOC110493277 arhgef3 coding downstream 95955 83704163 ~ 83809312 (+)
LOC110494743 LOC106566086 coding downstream 202550 83810758 ~ 83837755 (+)
LOC110494746 LOC106566088 coding downstream 242257 83850465 ~ 83860051 (+)
G1497974 NA non-coding upstream 1858 83605658 ~ 83605866 (+)
G1497947 NA non-coding upstream 78902 83528602 ~ 83528822 (+)
G1497916 NA non-coding upstream 88769 83511112 ~ 83518955 (+)
G1497938 NA non-coding upstream 136956 83459338 ~ 83470768 (+)
G1497978 NA non-coding downstream 10648 83618856 ~ 83622608 (+)
G1498007 NA non-coding downstream 79458 83687666 ~ 83689358 (+)
G1497989 NA non-coding downstream 94258 83702466 ~ 83702810 (+)
G1496351 LOC106566032 other upstream 1437974 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 1774623 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 2005567 81432188 ~ 81602161 (+)
G1495362 NA other upstream 2269561 81337017 ~ 81338163 (+)
G1495346 NA other upstream 2313798 81293440 ~ 81293926 (+)
G1497918 NA other downstream 6057 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 271724 83879805 ~ 83890067 (+)
G1498583 NA other downstream 517629 84125837 ~ 84174177 (+)
G1498913 NA other downstream 887721 84495929 ~ 84497398 (+)
G1498912 NA other downstream 907909 84516117 ~ 84567678 (+)

Expression


Co-expression Network