G1497918


Basic Information

Item Value
gene id G1497918
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83614265 ~ 83634495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1712329
ccatcactcctgtgttccaatggcacgttgttagctaatccaagtttatcatttttaaaagtctaattgattattagaaagcccttttgcaattgttagcaagctgaaaactgttgttctgattaaagaagcaataaaactggccttcttcagacttgttgagtatctggagcatcagcatttgtaggttcGATAACAGGCTCAAACAAAGACCtctcttctgaaactcatcagtctattcttgttctgagaaatgaaggctattctatgcgagactttgccaagaaactgaagatcttgtacaacgctgtgtactactcccttcacagaacagcgcaaactggccctaaccagaataaaaagagttggaggccccggtgcacaactgagcaagaggacaagtacattagtgtctagtttgagaaacagacgcctcacaagtcttcaactggcagcttcattaaatagtaccagcaaaacaccagtctcaacgtcagcagtaaagaggcaactccgggatgctggccttctaggcagagttcctctgtccagtgtctgtgttcttttgtccatcttaataTTTAATTTTTATTGGCCGGacagatatggctttttctttgcaactctgcctagaaggccagcatcccggagtcgcctcttcactgttgacgttgaatcTAAATAGTACCCGCTAAATACCAGACCCCACGTCAACAGTAGTTTATTtagtattttgttattaaagcagGCTAACATTAGCAAGCTAACGTTTAACCATGTggtttaacttctttgggacggggggcagtattgagtaacttggataaaaaggtgcccagagtaaactgcctgctactcagtcctaaAAGCTAGAATaagcatataattagtagatttggacactgaagtttctaaaactgtttgaatgatgtctgtgagtataacataactcatatggtaggcaaaaacctgataaaaaatccaaccaggaagtgggaaatctgaggttaagtttttcaactcagcccccattgaagatacagtgggatattagttatgtttcacttcccaaggcttccactagatgtcaacagtatttagaacctgttttgaggattctactctaaaggaggggctcataagggctctttgagtgagtggtctggcagagtgccacagcctctgCCTTGCGCGCTCACGTGAAAGAtagctacgttccacttcatttgtacagacaaaggaattgtccggttggaacattagtgaagttatgttaaaaacatcctaaagattgattccatacttagtttggcatgtttctacggactgtaacagaactttttgaaCTTTCGTCCGACATTCGGCGCAGCCTGAACGcgcatttggatttgtttaccaaacgctagcggaaccccagtcctagacaggttatcGAACaaataatgctatttctgactctgttgactccacaacatggcggatatctgtatggcttgttttgttgtctgagcgctgtactcaggttattgcatggtgtgctttttcggtaaagcttttttgaaatctgacacagcggttgcattaaaggagaagtggatctaaaattccatgcataacacttgtatcttttagcaatgtttactatgagtatttctgtaaattgatgtggctctctgcctattccccctcaggaaactaaaaagatttggcatgggtcctgagatcctcaaaaggttcaacagctgcaacatcgagagcatcctgaccggttgcatcactgcctggtatggcaattgctcggcctccaaccgcaaggcacttcagagggtagtgcgtacggcccagtacatcactggggcaaagctgcctgccatccaggacctctacaccaggcggtgtcagaggaaggccctaaaattgtcaaagaccccagccaccccagtcatagactgttctctctactaccagatggcaagcggtaccggagtgccaaaaaggcttcaacagtttttacccccaagccataagacacctgaacaggtaaccaatggctacccggactatttgcattgtgtgcctcccccaatcCCGCtgtgctgctattctctgtttagcttatatgcatagtcactaactaTACATTcaagtacatactacctcaattggcctgaccaaccagttctcccgcacattggctaaccgggctatctgcattgtgtcccaccacccgccaaccgctctttttacgcttctgctgctcatcatatatgcacagtcactttaacgatacctacatgtacatactacctcaataagcctgactaacaggtgtctgtctgtatatagccttgctactcttttttcaaatgtctttctgTTGCTTTATTTCTCTaattacctacacacacacacacacacacacacacacacacaaccttttttttggcaccattggttagagcctgtaagtaagcatttcactgtaaggtttacacctgttgtattcggcgcacatgacaaactttgatttgatttgcaaaatcaccagatgttttggaactattgaacataacgcaccaatgtaaactgagatttttggatataaatataaaatgtattgaacaaaacatgtatgtattgtgtaacatgaagtcctatgagtgtcatctgatgaagatcaaaggttagtgattaattttctctctttctgctttttgtgactcctctctttggctggaaaaatggctgggttttacTGTGACTAGGcactgacctaacaatcgtttggtgtgctttcgtagtaaagcctttttgaaatcggacactgtggctggatttacaacaagtttatctttaaaatggtgtaaaatacttgtatgtttgaggaattttaattgtgggatttctgttgtattgaatttggcaccctgtaATTTTACTGGCTGCtgttgaggtgggacgctagcgtcccgaatatcccagagaggttaaccaaAGCCAAGTTGGTTTTGTTTTCTATATCGTCTCTGGTTTAACTAAGAGCATTGTACCTATGtcgaggatttttttttttttttagcagagTACTTGGAAGATCAGCATGACTGGGTGgcagaagaggggggagaggcagCGTGAGAATAGACAGGGAAGACCCTCACTGGGGAAGAGGTCAGTGATTGAGGAGGGGGAGCCATGAGGTCATTCTCCAAACCAAATAATATCCAATATTGTGAACCACTAACCGCATACTTTGAGTTACAGTTTGATTGAAATAAAGACATTTTATTCTGtcagttttggtgcaggtacaatAAATGAAtgacttctctccatccctctgtcactAATATGTGGTGGTGAAGTTCTCTGCTCAGCTGACAGAGACAGGAGATACAGTCCATTCTGTTCCAACTAGGTAACCTTTGCTCTCCTCTATGCACATCACTCTGGGGACTTCCTGCCGGTAACCATGACTTCCACCAATCTCCCCTGTAACTTAAACATTAGTGGTACTGAGAGTTCCTCTAATTTCTTTGATGCTGTATGAAGCCATTGTGCCATAGGATATTTGACACATAGAGAGGATGATGACCTTGCTGCTGTCTATTGGTTAGAAAGATGGTTCTATACTGAATGTATGTGACAGTCACTGCTAAACAATATGATTAGTGTAGGTAAGGGATGAAGTGAGAACCTATGGAAGGATAGCTCTCCTCGAGGTGGGTTGGGCATGACATGACAGCAGGCTGTTCAATACTGAGCCATGCTGACCGACAAGTGGTGTTGATTTGTACAGGGCAATTTCATTTATTTGACTAAATGACTATCTATAGTTGCCTCTTGATACAGCCACGTCAGTCTTAAAATGGACTGTTACCTTGAAATGCAACTTTAAGATGTAAACTCCAATTGAACTCTGACATTTCCTGACATCTTattttcttctctctcactccagtTATTCTCAGGAGacaggtcagtgtgtgtagagGGAACACATTTGACCAGGGAGTCAGACTTCTACTTCATCGCCCTGGACCACTATACCAACAAGGCAGAGGACAGAGGCAAGGCAGAGGACGCCAAGTTTGGACCAATGAGTCACCAGCTTATCTTATGCCTTACACAGTTCCGACACATATCGCTCCACCTTCCTCAAACTCCAGTGCCCTACTTTTGTCTACCATTTTACCAATGTCTATGGATTGTACAAGGATTTGAATTTGGGACACTGAATCCATACTAAATCTAATTCCATTTCCTATACTGTTCTGGCCTCTCTATAGATTATGCTGATGCCCTGTTGTAAGAACCTGGAGATCTCCACTGTTTCTGAGGGAGGTGACCACAAACAGTGCCTGGGACACCTTCCAACGCTACTGCTGTCTGGAGAACAGCCAGAGGGTGGTCAAGACATCTGCTGCAACTTCATCTTTAGTGTGTCAGCTCTGCTGCACCTGGGAGCTGAAGGTATGGCACCGCATTCCCAACAGTCATGTATGCTTAAACATATtgccttgcgaaagtattcggcccccttgaactttgcgacctttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1712329 True 4560 TUCP 0.43 2 83614265 83634495

Neighbor

gene id symbol gene type direction distance location
irak1bp1 irak1bp1 coding upstream 5377 83603639 ~ 83608888 (+)
hesx1 LOC106582615 coding upstream 18724 83592762 ~ 83595541 (+)
LOC110494736 appl1 coding upstream 21646 83576027 ~ 83592619 (+)
LOC110494735 asb14 coding upstream 39081 83562178 ~ 83575184 (+)
LOC110494734 LOC106566095 coding upstream 52111 83560011 ~ 83562154 (+)
LOC110494741 il17rd coding downstream 7950 83642445 ~ 83701923 (+)
LOC110493277 arhgef3 coding downstream 69668 83704163 ~ 83809312 (+)
LOC110494743 LOC106566086 coding downstream 176263 83810758 ~ 83837755 (+)
LOC110494746 LOC106566088 coding downstream 215970 83850465 ~ 83860051 (+)
LOC110494747 LOC106566085 coding downstream 229323 83863818 ~ 83868195 (+)
G1497977 NA non-coding upstream 6057 83607724 ~ 83608208 (+)
G1497974 NA non-coding upstream 8399 83605658 ~ 83605866 (+)
G1497947 NA non-coding upstream 85443 83528602 ~ 83528822 (+)
G1497916 NA non-coding upstream 95310 83511112 ~ 83518955 (+)
G1498007 NA non-coding downstream 53171 83687666 ~ 83689358 (+)
G1497989 NA non-coding downstream 67971 83702466 ~ 83702810 (+)
G1498156 NA non-coding downstream 113893 83748388 ~ 83748612 (+)
G1496351 LOC106566032 other upstream 1444515 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 1781164 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 2012108 81432188 ~ 81602161 (+)
G1495362 NA other upstream 2276102 81337017 ~ 81338163 (+)
G1495346 NA other upstream 2320339 81293440 ~ 81293926 (+)
LOC110494749 LOC106566083 other downstream 245437 83879805 ~ 83890067 (+)
G1498583 NA other downstream 491342 84125837 ~ 84174177 (+)
G1498913 NA other downstream 861434 84495929 ~ 84497398 (+)
G1498912 NA other downstream 881622 84516117 ~ 84567678 (+)
LOC110493280 LOC106566113 other downstream 1043045 84379789 ~ 84685383 (+)

Expression


Co-expression Network