Gene
RNA
| Item | Value |
|---|---|
| gene id | G1498007 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 83687666 ~ 83689358 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106583766 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1712425 | True | 989 | lncRNA | 0.38 | 4 | 83687666 | 83689358 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494740 | LOC106566091 | coding | upstream | 56809 | 83629188 ~ 83630857 (+) |
| irak1bp1 | irak1bp1 | coding | upstream | 78778 | 83603639 ~ 83608888 (+) |
| hesx1 | LOC106582615 | coding | upstream | 92125 | 83592762 ~ 83595541 (+) |
| LOC110494736 | appl1 | coding | upstream | 95047 | 83576027 ~ 83592619 (+) |
| LOC110494735 | asb14 | coding | upstream | 112482 | 83562178 ~ 83575184 (+) |
| LOC110493277 | arhgef3 | coding | downstream | 14805 | 83704163 ~ 83809312 (+) |
| LOC110494743 | LOC106566086 | coding | downstream | 121400 | 83810758 ~ 83837755 (+) |
| LOC110494746 | LOC106566088 | coding | downstream | 161107 | 83850465 ~ 83860051 (+) |
| LOC110494747 | LOC106566085 | coding | downstream | 174460 | 83863818 ~ 83868195 (+) |
| LOC110494749 | LOC106566083 | coding | downstream | 190447 | 83879805 ~ 83890067 (+) |
| G1497978 | NA | non-coding | upstream | 65058 | 83618856 ~ 83622608 (+) |
| G1497977 | NA | non-coding | upstream | 79458 | 83607724 ~ 83608208 (+) |
| G1497974 | NA | non-coding | upstream | 81800 | 83605658 ~ 83605866 (+) |
| G1497947 | NA | non-coding | upstream | 158844 | 83528602 ~ 83528822 (+) |
| LOC110494741 | il17rd | non-coding | downstream | 11432 | 83642445 ~ 83701923 (+) |
| G1497989 | NA | non-coding | downstream | 13108 | 83702466 ~ 83702810 (+) |
| G1498156 | NA | non-coding | downstream | 59030 | 83748388 ~ 83748612 (+) |
| G1498161 | NA | non-coding | downstream | 68902 | 83758260 ~ 83758572 (+) |
| G1497918 | NA | other | upstream | 53171 | 83614265 ~ 83634495 (+) |
| G1496351 | LOC106566032 | other | upstream | 1517916 | 82163138 ~ 82169750 (+) |
| LOC110494698 | LOC106566043 | other | upstream | 1854565 | 81828571 ~ 81847540 (+) |
| LOC110494696 | LOC106582736 | other | upstream | 2085509 | 81432188 ~ 81602161 (+) |
| G1495362 | NA | other | upstream | 2349503 | 81337017 ~ 81338163 (+) |
| G1498583 | NA | other | downstream | 436479 | 84125837 ~ 84174177 (+) |
| G1498913 | NA | other | downstream | 806571 | 84495929 ~ 84497398 (+) |
| G1498912 | NA | other | downstream | 826759 | 84516117 ~ 84567678 (+) |
| LOC110493280 | LOC106566113 | other | downstream | 988182 | 84379789 ~ 84685383 (+) |
