Gene
RNA
| Item | Value |
|---|---|
| gene id | G1498172 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 83771757 ~ 83772386 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1712626 | True | 404 | lncRNA | 0.41 | 4 | 83771757 | 83772386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494741 | il17rd | coding | upstream | 69834 | 83642445 ~ 83701923 (+) |
| LOC110494740 | LOC106566091 | coding | upstream | 140900 | 83629188 ~ 83630857 (+) |
| irak1bp1 | irak1bp1 | coding | upstream | 162869 | 83603639 ~ 83608888 (+) |
| hesx1 | LOC106582615 | coding | upstream | 176216 | 83592762 ~ 83595541 (+) |
| LOC110494736 | appl1 | coding | upstream | 179138 | 83576027 ~ 83592619 (+) |
| LOC110494743 | LOC106566086 | coding | downstream | 38372 | 83810758 ~ 83837755 (+) |
| LOC110494746 | LOC106566088 | coding | downstream | 78079 | 83850465 ~ 83860051 (+) |
| LOC110494747 | LOC106566085 | coding | downstream | 91432 | 83863818 ~ 83868195 (+) |
| LOC110494749 | LOC106566083 | coding | downstream | 107419 | 83879805 ~ 83890067 (+) |
| LOC110494750 | LOC106566084 | coding | downstream | 117937 | 83890323 ~ 83892616 (+) |
| G1498171 | NA | non-coding | upstream | 1187 | 83770291 ~ 83770570 (+) |
| G1498161 | NA | non-coding | upstream | 13185 | 83758260 ~ 83758572 (+) |
| G1498156 | NA | non-coding | upstream | 23145 | 83748388 ~ 83748612 (+) |
| G1497989 | NA | non-coding | upstream | 68947 | 83702466 ~ 83702810 (+) |
| G1498203 | NA | non-coding | downstream | 33021 | 83805407 ~ 83805711 (+) |
| G1498212 | NA | non-coding | downstream | 55850 | 83828236 ~ 83828475 (+) |
| G1498185 | NA | non-coding | downstream | 65542 | 83837928 ~ 83839104 (+) |
| G1498215 | ccdc66 | non-coding | downstream | 71654 | 83844040 ~ 83844970 (+) |
| G1498233 | NA | non-coding | downstream | 142517 | 83914903 ~ 83915105 (+) |
| G1497918 | NA | other | upstream | 137262 | 83614265 ~ 83634495 (+) |
| G1496351 | LOC106566032 | other | upstream | 1602007 | 82163138 ~ 82169750 (+) |
| LOC110494698 | LOC106566043 | other | upstream | 1938656 | 81828571 ~ 81847540 (+) |
| LOC110494696 | LOC106582736 | other | upstream | 2169600 | 81432188 ~ 81602161 (+) |
| G1495362 | NA | other | upstream | 2433594 | 81337017 ~ 81338163 (+) |
| G1498583 | NA | other | downstream | 353451 | 84125837 ~ 84174177 (+) |
| G1498913 | NA | other | downstream | 723543 | 84495929 ~ 84497398 (+) |
| G1498912 | NA | other | downstream | 743731 | 84516117 ~ 84567678 (+) |
| LOC110493280 | LOC106566113 | other | downstream | 905154 | 84379789 ~ 84685383 (+) |
