G1498185



Basic Information


Item Value
gene id G1498185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83837928 ~ 83839104 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1712647
TCCCTTCAAAGCTTGTAAATAAACTAGTAACAGAGCCCTAGACTGGAAGTGTCagaatacccataaaacctagcggtcaaacaagaaagtggttccaatcgtttttccaccgtTCTTTTTTcccccataggggattttagaaacacttaaaataagggctgtgtttcgtgcagGTTTACCCTGGCATGACGTTTAACTGTAAATCTCTCTTGGACAAGGGGACTTCAAAAACAATACTAGTTAGTATCAATGTAGACAAATCGCTCTGACTTGGAACATATTACCAGTTACAGGGTCTTAtacatttacccccccccccccccccccccctaatcatcatcatcatcatatcatGTGATTCAATATATTCCtaagctcctgcacgtcatctagCTCACACTTTTGCTAACCGGTattgtccaaatgtagccaatttattcattactacatttagctaacagttAATCCAAAGATTCTTAAATTCGGCAGTCTGGTCCAGATCACCATGGCATTTGTACTCTTAtggcagctaattagcatttcattttggggggtaaatacaggagaATATATTGATAATCCTTGTCCGAGAGTTTTACATGAttatcaaaacgtcatgccagggtaagactacacgaaacacagcccttttgaactgtttctaaaatcccctatggacCGCTAAgctttatgggtattatgactcatactgtcgTACTCTATTCTATGGCTGCAAAAGCACCACTACATTTCAAGTGATCACAAATACCAACACTAAGATCATAGCCACTCACACACAGGCCATTACATTCTATATAATACCTACAATACTCTTCAAACCCATGTGGTCAGTAAAGTGCCAACATTTGCTTAAAATTTAAATACTCTTCACAAACTAAGATGTCGGTTCAATCATAAATGGTAAAGTGCTGTATGTTCCAGTTCAGAATAACCTAGTGCACACTGCGGTGATACAGCACATTCAACACAACAATGCTATCACAAACCGTTGTACAACCTGAGTGTTTACTAGGTCTATGTGCCTTTAGACGTGAGGCTGTGGGTCACGTGTTGAGGAGGTCAGTGGTGGTCCTCAGTAACAATCATTACAGGGTTCAGTCCTGTCTCCAGCTCTTTCTGCTTCTGCAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1712647 True 1151 lncRNA 0.41 2 83837928 83839104

Neighbor


gene id symbol gene type direction distance location
LOC110494743 LOC106566086 coding upstream 173 83810758 ~ 83837755 (+)
LOC110493277 arhgef3 coding upstream 28616 83704163 ~ 83809312 (+)
LOC110494741 il17rd coding upstream 136005 83642445 ~ 83701923 (+)
LOC110494740 LOC106566091 coding upstream 207071 83629188 ~ 83630857 (+)
irak1bp1 irak1bp1 coding upstream 229040 83603639 ~ 83608888 (+)
LOC110494746 LOC106566088 coding downstream 11361 83850465 ~ 83860051 (+)
LOC110494747 LOC106566085 coding downstream 24714 83863818 ~ 83868195 (+)
LOC110494749 LOC106566083 coding downstream 40701 83879805 ~ 83890067 (+)
LOC110494750 LOC106566084 coding downstream 51219 83890323 ~ 83892616 (+)
LOC110494751 LOC106566097 coding downstream 64817 83903921 ~ 83906399 (+)
G1498212 NA non-coding upstream 9453 83828236 ~ 83828475 (+)
G1498203 NA non-coding upstream 32217 83805407 ~ 83805711 (+)
G1498172 NA non-coding upstream 65542 83771757 ~ 83772386 (+)
G1498171 NA non-coding upstream 67358 83770291 ~ 83770570 (+)
G1498215 ccdc66 non-coding downstream 4936 83844040 ~ 83844970 (+)
G1498233 NA non-coding downstream 75799 83914903 ~ 83915105 (+)
G1498238 NA non-coding downstream 80286 83919390 ~ 83919689 (+)
G1498246 NA non-coding downstream 95792 83934896 ~ 83935104 (+)
G1498247 NA non-coding downstream 97123 83936227 ~ 83936427 (+)
G1497918 NA other upstream 203433 83614265 ~ 83634495 (+)
G1496351 LOC106566032 other upstream 1668178 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 2004827 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 2235771 81432188 ~ 81602161 (+)
G1495362 NA other upstream 2499765 81337017 ~ 81338163 (+)
G1498583 NA other downstream 286733 84125837 ~ 84174177 (+)
G1498913 NA other downstream 656825 84495929 ~ 84497398 (+)
G1498912 NA other downstream 677013 84516117 ~ 84567678 (+)
LOC110493280 LOC106566113 other downstream 838436 84379789 ~ 84685383 (+)

Expression



Co-expression Network