Gene
RNA
| Item | Value |
|---|---|
| gene id | G1498215 |
| gene name | ccdc66 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 83844040 ~ 83844970 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ccdc66 | Orthologous to human CCDC66 (coiled-coil domain containing 66). |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1712678 | True | 841 | lncRNA | 0.54 | 2 | 83844040 | 83844970 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494743 | LOC106566086 | coding | upstream | 6285 | 83810758 ~ 83837755 (+) |
| LOC110493277 | arhgef3 | coding | upstream | 34728 | 83704163 ~ 83809312 (+) |
| LOC110494741 | il17rd | coding | upstream | 142117 | 83642445 ~ 83701923 (+) |
| LOC110494740 | LOC106566091 | coding | upstream | 213183 | 83629188 ~ 83630857 (+) |
| irak1bp1 | irak1bp1 | coding | upstream | 235152 | 83603639 ~ 83608888 (+) |
| LOC110494746 | LOC106566088 | coding | downstream | 5495 | 83850465 ~ 83860051 (+) |
| LOC110494747 | LOC106566085 | coding | downstream | 18848 | 83863818 ~ 83868195 (+) |
| LOC110494749 | LOC106566083 | coding | downstream | 34835 | 83879805 ~ 83890067 (+) |
| LOC110494750 | LOC106566084 | coding | downstream | 45353 | 83890323 ~ 83892616 (+) |
| LOC110494751 | LOC106566097 | coding | downstream | 58951 | 83903921 ~ 83906399 (+) |
| G1498185 | NA | non-coding | upstream | 4936 | 83837928 ~ 83839104 (+) |
| G1498212 | NA | non-coding | upstream | 15565 | 83828236 ~ 83828475 (+) |
| G1498203 | NA | non-coding | upstream | 38329 | 83805407 ~ 83805711 (+) |
| G1498172 | NA | non-coding | upstream | 71654 | 83771757 ~ 83772386 (+) |
| G1498171 | NA | non-coding | upstream | 73470 | 83770291 ~ 83770570 (+) |
| G1498233 | NA | non-coding | downstream | 69933 | 83914903 ~ 83915105 (+) |
| G1498238 | NA | non-coding | downstream | 74420 | 83919390 ~ 83919689 (+) |
| G1498246 | NA | non-coding | downstream | 89926 | 83934896 ~ 83935104 (+) |
| G1498247 | NA | non-coding | downstream | 91257 | 83936227 ~ 83936427 (+) |
| G1498251 | NA | non-coding | downstream | 97269 | 83942239 ~ 83942540 (+) |
| G1497918 | NA | other | upstream | 209545 | 83614265 ~ 83634495 (+) |
| G1496351 | LOC106566032 | other | upstream | 1674290 | 82163138 ~ 82169750 (+) |
| LOC110494698 | LOC106566043 | other | upstream | 2010939 | 81828571 ~ 81847540 (+) |
| LOC110494696 | LOC106582736 | other | upstream | 2241883 | 81432188 ~ 81602161 (+) |
| G1495362 | NA | other | upstream | 2505877 | 81337017 ~ 81338163 (+) |
| G1498583 | NA | other | downstream | 280867 | 84125837 ~ 84174177 (+) |
| G1498913 | NA | other | downstream | 650959 | 84495929 ~ 84497398 (+) |
| G1498912 | NA | other | downstream | 671147 | 84516117 ~ 84567678 (+) |
| LOC110493280 | LOC106566113 | other | downstream | 832570 | 84379789 ~ 84685383 (+) |
