G1498258


Basic Information

Item Value
gene id G1498258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83954803 ~ 83955072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1712725
actctactttgtctctatactgacgcttagcttgtttgattgactagcggagggaatagctacactgtttgtattcggttatGTTTCCGGTCAcattgccctgattaaaagcagtggttcgcactttcagttttgtgcgaatgctgccatcaatccacggtttctggttggggaaggttttaatattcgccgtgggtacaacatcaccgatgcacttgctaataaactcgctcaccgaatcagcgtggcatcaatgttgttgttctacgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1712725 True 270 lncRNA 0.45 1 83954803 83955072

Neighbor

gene id symbol gene type direction distance location
LOC110494751 LOC106566097 coding upstream 48404 83903921 ~ 83906399 (+)
LOC110494750 LOC106566084 coding upstream 62187 83890323 ~ 83892616 (+)
LOC110494749 LOC106566083 coding upstream 64736 83879805 ~ 83890067 (+)
LOC110494747 LOC106566085 coding upstream 86608 83863818 ~ 83868195 (+)
LOC110494746 LOC106566088 coding upstream 94752 83850465 ~ 83860051 (+)
LOC110494753 LOC106566082 coding downstream 49184 84004256 ~ 84017161 (+)
LOC110494755 LOC106566080 coding downstream 124481 84079553 ~ 84150390 (+)
LOC110493278 LOC106582687 coding downstream 254435 84209507 ~ 84352493 (+)
LOC110493280 LOC106566113 coding downstream 424717 84379789 ~ 84685383 (+)
LOC118940500 NA coding downstream 525677 84480749 ~ 84483490 (+)
G1498253 NA non-coding upstream 9668 83944769 ~ 83945135 (+)
G1498251 NA non-coding upstream 12263 83942239 ~ 83942540 (+)
G1498247 NA non-coding upstream 18376 83936227 ~ 83936427 (+)
G1498246 NA non-coding upstream 19699 83934896 ~ 83935104 (+)
G1498238 NA non-coding upstream 35114 83919390 ~ 83919689 (+)
G1498259 NA non-coding downstream 1492 83956564 ~ 83956839 (+)
G1498436 NA non-coding downstream 19824 83974896 ~ 83975137 (+)
G1498438 NA non-coding downstream 20462 83975534 ~ 83975749 (+)
G1498440 NA non-coding downstream 27016 83982088 ~ 83982360 (+)
G1498451 NA non-coding downstream 33538 83988610 ~ 83988970 (+)
G1497918 NA other upstream 320308 83614265 ~ 83634495 (+)
G1496351 LOC106566032 other upstream 1785053 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 2121702 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 2352646 81432188 ~ 81602161 (+)
G1498583 NA other downstream 170765 84125837 ~ 84174177 (+)
G1498913 NA other downstream 540857 84495929 ~ 84497398 (+)
G1498912 NA other downstream 561045 84516117 ~ 84567678 (+)
LOC110493283 LOC106566114 other downstream 834060 84789132 ~ 84793175 (+)

Expression


Co-expression Network