G1498438


Basic Information

Item Value
gene id G1498438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83975534 ~ 83975749 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1712991
gtgaaagtgttgtggtcagatgagaccaaaatggagctctttggcatcgactcaactcgccgtgtttagaggaggaggaatgctgcctatgaccccaagaacaccatccccaccgtcaaacatggaggtggaaacattatgctttgagggtgtttttctgctaaggggacaggacaacttaaCCTACCAAATAAACCTAcaattaaaattatagac

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1712991 True 216 lncRNA 0.45 1 83975534 83975749

Neighbor

gene id symbol gene type direction distance location
LOC110494751 LOC106566097 coding upstream 69135 83903921 ~ 83906399 (+)
LOC110494750 LOC106566084 coding upstream 82918 83890323 ~ 83892616 (+)
LOC110494749 LOC106566083 coding upstream 85467 83879805 ~ 83890067 (+)
LOC110494747 LOC106566085 coding upstream 107339 83863818 ~ 83868195 (+)
LOC110494746 LOC106566088 coding upstream 115483 83850465 ~ 83860051 (+)
LOC110494753 LOC106566082 coding downstream 28507 84004256 ~ 84017161 (+)
LOC110494755 LOC106566080 coding downstream 103804 84079553 ~ 84150390 (+)
LOC110493278 LOC106582687 coding downstream 233758 84209507 ~ 84352493 (+)
LOC110493280 LOC106566113 coding downstream 404040 84379789 ~ 84685383 (+)
LOC118940500 NA coding downstream 505000 84480749 ~ 84483490 (+)
G1498436 NA non-coding upstream 397 83974896 ~ 83975137 (+)
G1498259 NA non-coding upstream 18695 83956564 ~ 83956839 (+)
G1498258 NA non-coding upstream 20462 83954803 ~ 83955072 (+)
G1498253 NA non-coding upstream 30399 83944769 ~ 83945135 (+)
G1498251 NA non-coding upstream 32994 83942239 ~ 83942540 (+)
G1498440 NA non-coding downstream 6339 83982088 ~ 83982360 (+)
G1498451 NA non-coding downstream 12861 83988610 ~ 83988970 (+)
G1498507 LOC106566081 non-coding downstream 56645 84032394 ~ 84038525 (+)
G1498517 NA non-coding downstream 71147 84046896 ~ 84047152 (+)
G1498519 NA non-coding downstream 75176 84050925 ~ 84057495 (+)
G1497918 NA other upstream 341039 83614265 ~ 83634495 (+)
G1496351 LOC106566032 other upstream 1805784 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 2142433 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 2373377 81432188 ~ 81602161 (+)
G1498583 NA other downstream 150088 84125837 ~ 84174177 (+)
G1498913 NA other downstream 520180 84495929 ~ 84497398 (+)
G1498912 NA other downstream 540368 84516117 ~ 84567678 (+)
LOC110493283 LOC106566114 other downstream 813383 84789132 ~ 84793175 (+)

Expression


Co-expression Network