G1498544


Basic Information

Item Value
gene id G1498544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 84068538 ~ 84069086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1713125
acctgggtgtctggttagactgtaaactctccttccagactcacattaagtatctccaatccaaaattaaatctagaatcggcttcctatttcgcaaccaagcatccttcactcatgctgccaaacatacactcgtaaaactgaccatcctaccgatcctcgacttcagcgatgtcatttacaaaatagcctccaacactctactcaacaaattggatgcagtctttcacagtgccatccgttttgtcaccaaagccccatatactacccaccaacgctctcgttggttggccctcacttcatactcgtcgccaaacccactggctccaggtcatctacaagtctctgccaggtaaagccccaccttatctcagcttactggtcaccatttatttatttattttattttacctttatttaaccaggttagctagttgagagcaagttctcatttgcaactgcgacctggtcaagataaagcaaagcagtttgacacatacaacaacacagagttacacatggaataaacaaacagtcaataatacagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1713125 True 549 lncRNA 0.43 1 84068538 84069086

Neighbor

gene id symbol gene type direction distance location
LOC110494753 LOC106566082 coding upstream 51377 84004256 ~ 84017161 (+)
LOC110494751 LOC106566097 coding upstream 162139 83903921 ~ 83906399 (+)
LOC110494750 LOC106566084 coding upstream 175922 83890323 ~ 83892616 (+)
LOC110494749 LOC106566083 coding upstream 178471 83879805 ~ 83890067 (+)
LOC110494747 LOC106566085 coding upstream 200343 83863818 ~ 83868195 (+)
LOC110494755 LOC106566080 coding downstream 10467 84079553 ~ 84150390 (+)
LOC110493278 LOC106582687 coding downstream 140421 84209507 ~ 84352493 (+)
LOC110493280 LOC106566113 coding downstream 310703 84379789 ~ 84685383 (+)
LOC118940500 NA coding downstream 411663 84480749 ~ 84483490 (+)
LOC110494759 LOC106593203 coding downstream 646493 84715579 ~ 84718668 (+)
G1498540 NA non-coding upstream 973 84067340 ~ 84067565 (+)
G1498519 NA non-coding upstream 11043 84050925 ~ 84057495 (+)
G1498517 NA non-coding upstream 21386 84046896 ~ 84047152 (+)
G1498507 LOC106566081 non-coding upstream 30013 84032394 ~ 84038525 (+)
G1498451 NA non-coding upstream 79568 83988610 ~ 83988970 (+)
G1498558 NA non-coding downstream 8137 84077223 ~ 84077516 (+)
G1498559 NA non-coding downstream 8849 84077935 ~ 84078168 (+)
G1498576 NA non-coding downstream 36751 84105837 ~ 84106451 (+)
G1498610 NA non-coding downstream 124341 84193427 ~ 84194061 (+)
G1498614 NA non-coding downstream 134969 84204055 ~ 84204266 (+)
G1497918 NA other upstream 434043 83614265 ~ 83634495 (+)
G1496351 LOC106566032 other upstream 1898788 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 2235437 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 2466381 81432188 ~ 81602161 (+)
G1498583 NA other downstream 56751 84125837 ~ 84174177 (+)
G1498913 NA other downstream 426843 84495929 ~ 84497398 (+)
G1498912 NA other downstream 447031 84516117 ~ 84567678 (+)
LOC110493283 LOC106566114 other downstream 720046 84789132 ~ 84793175 (+)

Expression


Co-expression Network