G1498843


Basic Information

Item Value
gene id G1498843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 84367347 ~ 84367591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1713467
aatttaacgcgtTCATACATGATTTACGTTGTTATTACaaattgattacactatcacttgtATTTCACaacaactgtgaattgagccacatttattgtaaACCTATGTGTATTGAACTCTATTCCCGAGGATAAACCATACTTAGTTGGGAAAAAAATATcttgggtattgagtagactgataccccatttcattgatcccaaATCCTTAGTTAAAGCTGTAcattgcaatatgaatgtcaaaaC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1713467 True 245 lncRNA 0.33 1 84367347 84367591

Neighbor

gene id symbol gene type direction distance location
LOC110493278 LOC106582687 coding upstream 14854 84209507 ~ 84352493 (+)
LOC110494755 LOC106566080 coding upstream 216957 84079553 ~ 84150390 (+)
LOC110494753 LOC106566082 coding upstream 350186 84004256 ~ 84017161 (+)
LOC110494751 LOC106566097 coding upstream 460948 83903921 ~ 83906399 (+)
LOC110494750 LOC106566084 coding upstream 474731 83890323 ~ 83892616 (+)
LOC110493280 LOC106566113 coding downstream 12198 84379789 ~ 84685383 (+)
LOC118940500 NA coding downstream 113158 84480749 ~ 84483490 (+)
LOC110494759 LOC106593203 coding downstream 347988 84715579 ~ 84718668 (+)
LOC110494762 p38a coding downstream 364644 84732235 ~ 84765940 (+)
LOC110493283 LOC106566114 coding downstream 421583 84789132 ~ 84793175 (+)
G1498842 NA non-coding upstream 1288 84365857 ~ 84366059 (+)
G1498841 NA non-coding upstream 1648 84365473 ~ 84365699 (+)
G1498839 NA non-coding upstream 1910 84365095 ~ 84365437 (+)
G1498618 NA non-coding upstream 29092 84335291 ~ 84338255 (+)
G1498614 NA non-coding upstream 163081 84204055 ~ 84204266 (+)
G1498845 NA non-coding downstream 1075 84368666 ~ 84369743 (+)
G1498854 NA non-coding downstream 14251 84381842 ~ 84382601 (+)
G1498891 NA non-coding downstream 86502 84454093 ~ 84494343 (+)
G1498912 NA non-coding downstream 148526 84516117 ~ 84567678 (+)
G1498925 NA non-coding downstream 150985 84518576 ~ 84519731 (+)
G1498583 NA other upstream 193170 84125837 ~ 84174177 (+)
LOC110494749 LOC106566083 other upstream 486159 83879805 ~ 83890067 (+)
G1497918 NA other upstream 732852 83614265 ~ 83634495 (+)
G1496351 LOC106566032 other upstream 2197597 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 2534246 81828571 ~ 81847540 (+)
G1498913 NA other downstream 128338 84495929 ~ 84497398 (+)
G1499159 NA other downstream 442940 84810531 ~ 84811185 (+)

Expression


Co-expression Network