G1498891


Basic Information

Item Value
gene id G1498891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 84454093 ~ 84494343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1713527
taacgagggtatatacagggggtaccaagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagctggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagccggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagccggtaccgagtcaatgtgcaggggtacaggttagtaatgagactacatacagggggtaccaagtcaatgtgcaggggtacaggttagtaatgagactatataca
>TU1713528
taacgagggtatatacagggggtaccaagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagctggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagccggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggggtacaggttagtaatgagactatatacagggagagccggtaccgagtcaatgtgcaggggtacaggttagtaatgagactacatacagggggtaccaagtcaatgtgcaggggtacaggttagtaatgagactatataca
>TU1713531
taacgagggtatatacagggggtaccaagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagctggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggagagccggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggggtaccgagtcaatgtgcaggggtacaggttagtaatgagactatatacagggggtacagAAGCAATGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1713527 False 353 lncRNA 0.47 3 84454093 84455012
TU1713528 False 385 lncRNA 0.46 2 84454093 84455012
TU1713531 True 261 lncRNA 0.47 3 84454093 84494343

Neighbor

gene id symbol gene type direction distance location
LOC110493278 LOC106582687 coding upstream 101600 84209507 ~ 84352493 (+)
LOC110494755 LOC106566080 coding upstream 303703 84079553 ~ 84150390 (+)
LOC110494753 LOC106566082 coding upstream 436932 84004256 ~ 84017161 (+)
LOC110494751 LOC106566097 coding upstream 547694 83903921 ~ 83906399 (+)
LOC110494750 LOC106566084 coding upstream 561477 83890323 ~ 83892616 (+)
LOC110494759 LOC106593203 coding downstream 221236 84715579 ~ 84718668 (+)
LOC110494762 p38a coding downstream 237892 84732235 ~ 84765940 (+)
LOC110493283 LOC106566114 coding downstream 294831 84789132 ~ 84793175 (+)
si:dkey-33m11.6 LOC105030694 coding downstream 302845 84797188 ~ 84798988 (+)
ddx19 LOC106566108 coding downstream 346174 84840517 ~ 84848351 (+)
G1498854 NA non-coding upstream 71492 84381842 ~ 84382601 (+)
G1498845 NA non-coding upstream 84350 84368666 ~ 84369743 (+)
G1498843 NA non-coding upstream 86502 84367347 ~ 84367591 (+)
G1498842 NA non-coding upstream 88034 84365857 ~ 84366059 (+)
G1498841 NA non-coding upstream 88394 84365473 ~ 84365699 (+)
G1498912 NA non-coding downstream 21774 84516117 ~ 84567678 (+)
G1498925 NA non-coding downstream 24233 84518576 ~ 84519731 (+)
G1498915 NA non-coding downstream 34536 84528879 ~ 84546700 (+)
G1498932 NA non-coding downstream 42699 84537042 ~ 84538909 (+)
G1498933 NA non-coding downstream 43925 84538268 ~ 84552520 (+)
G1498583 NA other upstream 279916 84125837 ~ 84174177 (+)
LOC110494749 LOC106566083 other upstream 572905 83879805 ~ 83890067 (+)
G1497918 NA other upstream 819598 83614265 ~ 83634495 (+)
G1496351 LOC106566032 other upstream 2284343 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 2620992 81828571 ~ 81847540 (+)
G1498913 NA other downstream 1586 84495929 ~ 84497398 (+)
LOC110493280 LOC106566113 other downstream 183197 84379789 ~ 84685383 (+)
G1499159 NA other downstream 316188 84810531 ~ 84811185 (+)

Expression


Co-expression Network