Gene
RNA
| Item | Value |
|---|---|
| gene id | G1499457 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 84731319 ~ 84731684 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1714248 | True | 366 | lncRNA | 0.30 | 1 | 84731319 | 84731684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494760 | ca119 | coding | downstream | 590 | 84724945 ~ 84730729 (-) |
| LOC110493281 | LOC106593201 | coding | downstream | 17922 | 84690785 ~ 84713397 (-) |
| LOC110494754 | LOC106566081 | coding | downstream | 684781 | 84032365 ~ 84046538 (-) |
| ccdc66 | LOC106566088 | coding | downstream | 879262 | 83837851 ~ 83860046 (-) |
| si:dkey-261l7.2 | LOC106566092 | coding | downstream | 1102255 | 83608842 ~ 83629064 (-) |
| slc32a1 | LOC106566112 | coding | upstream | 150304 | 84881988 ~ 84887491 (-) |
| LOC110494769 | LOC106566115 | coding | upstream | 218836 | 84950520 ~ 84995003 (-) |
| LOC118940503 | NA | coding | upstream | 459113 | 85190797 ~ 85204675 (-) |
| shmt2 | shmt2 | coding | upstream | 568622 | 85300306 ~ 85342666 (-) |
| LOC110487407 | NA | coding | upstream | 584661 | 85316345 ~ 85318853 (-) |
| G1499456 | NA | non-coding | downstream | 2405 | 84727520 ~ 84728914 (-) |
| G1499450 | NA | non-coding | downstream | 16212 | 84714846 ~ 84715107 (-) |
| G1499131 | NA | non-coding | downstream | 44089 | 84682550 ~ 84687230 (-) |
| G1499130 | NA | non-coding | downstream | 48921 | 84681800 ~ 84682398 (-) |
| G1499470 | LOC106572737 | non-coding | upstream | 20400 | 84752084 ~ 84754258 (-) |
| G1499472 | NA | non-coding | upstream | 23098 | 84754782 ~ 84755147 (-) |
| G1499487 | NA | non-coding | upstream | 38650 | 84770334 ~ 84770640 (-) |
| G1499494 | LOC106566109 | non-coding | upstream | 59502 | 84791186 ~ 84857468 (-) |
| G1499482 | LOC106566108 | non-coding | upstream | 112758 | 84844442 ~ 84845629 (-) |
| G1498522 | NA | other | downstream | 673927 | 84051010 ~ 84057392 (-) |
| G1498442 | NA | other | downstream | 748425 | 83982341 ~ 83982894 (-) |
| G1498077 | NA | other | downstream | 1125566 | 83605243 ~ 83605753 (-) |
| G1496921 | NA | other | downstream | 2069681 | 82629246 ~ 82661638 (-) |
| G1496689 | NA | other | downstream | 2485332 | 82235128 ~ 82245987 (-) |
| G1499671 | NA | other | upstream | 489441 | 85221125 ~ 85223119 (-) |
| G1499684 | NA | other | upstream | 554972 | 85251788 ~ 85288117 (-) |
| LOC110494779 | ddit3 | other | upstream | 1508034 | 86236554 ~ 86242991 (-) |
| G1500834 | LOC106566150 | other | upstream | 1717995 | 86449679 ~ 86450734 (-) |
| LOC110493290 | map3k12 | other | upstream | 2066381 | 86798065 ~ 86880836 (-) |
