G1499180


Basic Information

Item Value
gene id G1499180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 84772884 ~ 84773169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1713897
tttatactttgacttttaatacttaagtatattttagcaattccatttactctTGATACTAAAGTATAATTAAAACCAAATGTTatactaaagtatatttaaaaccaaatgctttcagacttttaatcaagtagtattttactgggtgacttttactgaAGTCgtgttctattaaggtatctttacttttactcaagtatgacaatttagtcgTTTTTCCACGCTGGTCAgccagcatgcttcagttcggctgatGGCTAGCCGAAGTCGGTTAGCGAACCGAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1713897 True 286 lncRNA 0.33 1 84772884 84773169

Neighbor

gene id symbol gene type direction distance location
LOC110494762 p38a coding upstream 6944 84732235 ~ 84765940 (+)
LOC110494759 LOC106593203 coding upstream 54216 84715579 ~ 84718668 (+)
LOC110493280 LOC106566113 coding upstream 87846 84379789 ~ 84685383 (+)
LOC118940500 NA coding upstream 289394 84480749 ~ 84483490 (+)
LOC110493278 LOC106582687 coding upstream 420391 84209507 ~ 84352493 (+)
LOC110493283 LOC106566114 coding downstream 16005 84789132 ~ 84793175 (+)
si:dkey-33m11.6 LOC105030694 coding downstream 24019 84797188 ~ 84798988 (+)
ddx19 LOC106566108 coding downstream 67348 84840517 ~ 84848351 (+)
LOC110494765 LOC106566109 coding downstream 80156 84853325 ~ 84857469 (+)
LOC110494766 LOC106566111 coding downstream 85516 84858685 ~ 84869382 (+)
G1499177 NA non-coding upstream 2905 84769648 ~ 84769979 (+)
G1499169 NA non-coding upstream 34697 84737312 ~ 84738187 (+)
G1499164 NA non-coding upstream 41200 84731309 ~ 84731684 (+)
G1499161 NA non-coding upstream 49079 84723532 ~ 84723805 (+)
G1499146 NA non-coding upstream 60468 84712130 ~ 84712416 (+)
G1499197 NA non-coding downstream 54037 84827206 ~ 84836536 (+)
G1499215 NA non-coding downstream 119564 84892733 ~ 84892972 (+)
G1499225 NA non-coding downstream 141773 84914942 ~ 84916728 (+)
G1499238 NA non-coding downstream 184487 84957656 ~ 84958022 (+)
G1499257 NA non-coding downstream 228518 85001687 ~ 85001910 (+)
G1498912 NA other upstream 207277 84516117 ~ 84567678 (+)
G1498913 NA other upstream 275486 84495929 ~ 84497398 (+)
G1498583 NA other upstream 598707 84125837 ~ 84174177 (+)
LOC110494749 LOC106566083 other upstream 891696 83879805 ~ 83890067 (+)
G1499159 NA other downstream 37362 84810531 ~ 84811185 (+)
G1499347 NA other downstream 441624 85214793 ~ 85216073 (+)
LOC110494772 LOC105007909 other downstream 495957 85269122 ~ 85288116 (+)
G1499374 NA other downstream 518616 85291785 ~ 85293121 (+)

Expression


Co-expression Network